RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 NIPA1Q7RTP0 329 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 CCDC60Q8IWA6 550 aaPredicted RBP7.59□□□□□ -1.19
PSEN1-216ENST00000556066 BICD2Q8TD16 824 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 KCNB2Q92953 911 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 MRPL38Q96DV4 380 aaKnown RBP7.59□□□□□ -1.19
PSEN1-216ENST00000556066 PPP1R16BQ96T49 567 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 ZMYND12Q9H0C1 365 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 UBE2ZQ9H832 354 aaPredicted RBP7.59□□□□□ -1.19
PSEN1-216ENST00000556066 ZNF302Q9NR11 478 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 VPS54Q9P1Q0 977 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 PADI3Q9ULW8 664 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 SAMM50Q9Y512 469 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 PCDHA2Q9Y5H9 948 aa7.59□□□□□ -1.19
PSEN1-216ENST00000556066 ADGRA3Q8IWK6 1321 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 FNDC1Q4ZHG4 1894 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-216ENST00000556066 CACNA1HO95180 2353 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 IGLV3-22A0A075B6J6 115 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 SMIM35A0A1B0GVV1 85 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 ESYT2A0FGR8 921 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 H3BNC9 293 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 ACTN4O43707 911 aaKnown RBP7.58□□□□□ -1.2
PSEN1-216ENST00000556066 HBP1O60381 514 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 CYP3A4P08684 503 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 PDIA3P30101 505 aaKnown RBP7.58□□□□□ -1.2
PSEN1-216ENST00000556066 NLRP5P59047 1200 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 SETQ01105 290 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-216ENST00000556066 NTRK3Q16288 839 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 PAN2Q504Q3 1202 aaKnown RBP7.58□□□□□ -1.2
PSEN1-216ENST00000556066 TIGD5Q53EQ6 642 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 TMEM31Q5JXX7 168 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 MCTP2Q6DN12 878 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 METTL13Q8N6R0 699 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 BANK1Q8NDB2 785 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 CCDC148Q8NFR7 591 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 ATP8B4Q8TF62 1192 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 FTHL17Q9BXU8 183 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 RNF26Q9BY78 433 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-216ENST00000556066 CELF4Q9BZC1 486 aaKnown RBP7.58□□□□□ -1.2
PSEN1-216ENST00000556066 CD320Q9NPF0 282 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 TBC1D22BQ9NU19 505 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 LRFN2Q9ULH4 789 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 CACNA1AO00555 2505 aa7.58□□□□□ -1.2
PSEN1-216ENST00000556066 ZDBF2Q9HCK1 2354 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 COL4A6Q14031 1691 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 IGSF9BQ9UPX0 1349 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 TRIOO75962 3097 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 WDR87Q6ZQQ6 2873 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 IGKV6D-21A0A0A0MT36 114 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 FAM86C2PA6NEL3 165 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 H3BQ06 376 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 CPLX1O14810 134 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 GRM6O15303 877 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 DHX15O43143 795 aaKnown RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 CHMP2AO43633 222 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 GPR37L1O60883 481 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 RPS6KA5O75582 802 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 DGKIO75912 1065 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 PSAPP07602 524 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 STAG3L1P0CL83 205 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 IFNAR1P17181 557 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 BMPR1AP36894 532 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 SSRP1Q08945 709 aaKnown RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 STK3Q13188 491 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 KIZQ2M2Z5 673 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 TCEAL5Q5H9L2 206 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 ZNF484Q5JVG2 852 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 TMCO4Q5TGY1 634 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 ZNF746Q6NUN9 644 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 RUFY3Q7L099 469 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 ZNF598Q86UK7 904 aaKnown RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 RTN4RL1Q86UN2 441 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 NPAS4Q8IUM7 802 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 TRIM22Q8IYM9 498 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 KIAA0319LQ8IZA0 1049 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 NME8Q8N427 588 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 FBXL16Q8N461 479 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 CRYGNQ8WXF5 182 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 LINC01599Q8WXQ3 324 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 C11orf84Q9BUA3 381 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 AGXT2Q9BYV1 514 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 UPF3BQ9BZI7 483 aaKnown RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 NSUN3Q9H649 340 aaKnown RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 ALG13Q9NP73 1137 aaKnown RBP7.57□□□□□ -1.2
PSEN1-216ENST00000556066 GABBR1Q9UBS5 961 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 HCN4Q9Y3Q4 1203 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 RWDD3Q9Y3V2 267 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 PCDHA10Q9Y5I2 948 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 CYP46A1Q9Y6A2 500 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 SQORQ9Y6N5 450 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 PLXNA4Q9HCM2 1894 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 COL1A2P08123 1366 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 NID2Q14112 1375 aa7.57□□□□□ -1.2
PSEN1-216ENST00000556066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 DENND3A2RUS2 1198 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 FAM187AA6NFU0 413 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 ZBTB42B2RXF5 422 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 GAS7O60861 476 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 VTNP04004 478 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 RB1P06400 928 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 ATP4AP20648 1035 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms