RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 PPP4R3AQ6IN85 833 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 MIER3Q7Z3K6 550 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 KRT25Q7Z3Z0 450 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 ZNF410Q86VK4 478 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 GCOM2Q9BZD3 368 aaPredicted RBP8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 CWH43Q9H720 699 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 C11orf16Q9NQ32 467 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 TYW1Q9NV66 732 aaKnown RBP8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 CD207Q9UJ71 328 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 AKT3Q9Y243 479 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 HCN4Q9Y3Q4 1203 aa8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 MYH9P35579 1960 aaKnown RBP8.77□□□□□ -1.01
PTCSC3-201ENST00000556013 EVPLQ92817 2033 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 COL4A4P53420 1690 aaPredicted RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 ZNF623O75123 536 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 MAFO75444 373 aaPredicted RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 FGF18O76093 207 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 STBD1O95210 358 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 VTNP04004 478 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 ATF7P17544 494 aaPredicted RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 DNAJB1P25685 340 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 PLA2G5P39877 138 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 PSMC5P62195 406 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 PRKCEQ02156 737 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 KRT17Q04695 432 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 DLX2Q07687 328 aaPredicted RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 BMS1Q14692 1282 aaKnown RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 NONOQ15233 471 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 ANKRD1Q15327 319 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 NPY5RQ15761 445 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 SPOUT1Q5T280 376 aaKnown RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 EP400NLQ6ZTU2 488 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 ECHDC2Q86YB7 292 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 SMRP1Q8NCR6 262 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 ETNPPLQ8TBG4 499 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 MICAL1Q8TDZ2 1067 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 MRPS27Q92552 414 aaKnown RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 KHSRPQ92945 711 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 FAM122AQ96E09 287 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 CASD1Q96PB1 797 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 CEP89Q96ST8 783 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 UNC45AQ9H3U1 944 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 TLE6Q9H808 572 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 NCOA5Q9HCD5 579 aaKnown RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 TLR9Q9NR96 1032 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 PDRG1Q9NUG6 133 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 CLEC1BQ9P126 229 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 DAXXQ9UER7 740 aaPredicted RBP8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 STK39Q9UEW8 545 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 NLRC5Q86WI3 1866 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 STK36Q9NRP7 1315 aa8.76□□□□□ -1.01
PTCSC3-201ENST00000556013 FSCN2O14926 492 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 ASAP2O43150 1006 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 GAS2O43903 313 aaKnown RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 PFKFB2O60825 505 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 P4HBP07237 508 aaKnown RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 SRGAP2BP0DMP2 458 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 HOXB8P17481 243 aaPredicted RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 IRS1P35568 1242 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 QARSP47897 775 aaKnown RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 NDUFV1P49821 464 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 CLCN3P51790 818 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 PPP2R5CQ13362 524 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 KCNC3Q14003 757 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 CBX2Q14781 532 aaPredicted RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 PCBP1Q15365 356 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 DUSP6Q16828 381 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 PAN2Q504Q3 1202 aaKnown RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 HERC4Q5GLZ8 1057 aaPredicted RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 KCNT2Q6UVM3 1135 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 BMP8AQ7Z5Y6 402 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 NEK8Q86SG6 692 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 ZNF598Q86UK7 904 aaKnown RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 C4orf19Q8IY42 314 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 THNSL1Q8IYQ7 743 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 ABI1Q8IZP0 508 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 LRRC43Q8N309 656 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 COLGALT1Q8NBJ5 622 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 WASF1Q92558 559 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 PHF20Q9BVI0 1012 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 MRPL9Q9BYD2 267 aaKnown RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 SLKQ9H2G2 1235 aaPredicted RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 IGFLR1Q9H665 355 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 KCNMB3Q9NPA1 279 aa8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 DDX25Q9UHL0 483 aaKnown RBP8.75□□□□□ -1.01
PTCSC3-201ENST00000556013 CCDC194A0A1B0GVG4 234 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 TBX10O75333 385 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 TDP2O95551 362 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 SFPQP23246 707 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 NRIP1P48552 1158 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 GATMP50440 423 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 RAB27AP51159 221 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 ERVFC1P60507 584 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 POU5F1BQ06416 359 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 SCRN1Q12765 414 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 GIT2Q14161 759 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 EPHA7Q15375 998 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 LRRC55Q6ZSA7 311 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 OTUD6AQ7L8S5 288 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 TRMT1LQ7Z2T5 733 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms