RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 CATSPER3Q86XQ3 398 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 C4orf19Q8IY42 314 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 NEK9Q8TD19 979 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 SCLYQ96I15 445 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 GDF15Q99988 308 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 MMTAG2Q9BU76 263 aaKnown RBP10.04□□□□□ -0.8
CHD8-210ENST00000555962 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
CHD8-210ENST00000555962 ZSWIM4Q9H7M6 989 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 NRBP2Q9NSY0 501 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 RABGEF1Q9UJ41 708 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 FBXO2Q9UK22 296 aaPredicted RBP10.04□□□□□ -0.8
CHD8-210ENST00000555962 CEP131Q9UPN4 1083 aa10.04□□□□□ -0.8
CHD8-210ENST00000555962 DKC1O60832 514 aaKnown RBP eCLIP10.03□□□□□ -0.81e-18■■■■■ 28.7
CHD8-210ENST00000555962 LYPLA2O95372 231 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 CKBP12277 381 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 RPA1P27694 616 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 YWHABP31946 246 aaKnown RBP10.03□□□□□ -0.8
CHD8-210ENST00000555962 EPHB4P54760 987 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 DNM1Q05193 864 aaKnown RBP10.03□□□□□ -0.8
CHD8-210ENST00000555962 BFSP2Q13515 415 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 MBTPS1Q14703 1052 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 GPNMBQ14956 572 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 SLC39A14Q15043 492 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 ZNF618Q5T7W0 954 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 MFSD5Q6N075 450 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 CAGE1Q8TC20 777 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 SNX29Q8TEQ0 813 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 PIGOQ8TEQ8 1089 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 DNAJB3Q8WWF6 145 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 TSC1Q92574 1164 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 TNPO1Q92973 898 aaKnown RBP10.03□□□□□ -0.8
CHD8-210ENST00000555962 ZNF396Q96N95 335 aaPredicted RBP10.03□□□□□ -0.8
CHD8-210ENST00000555962 OSBPL7Q9BZF2 842 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 TUFT1Q9NNX1 390 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 CYP26B1Q9NR63 512 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
CHD8-210ENST00000555962 PCDHA2Q9Y5H9 948 aa10.03□□□□□ -0.8
CHD8-210ENST00000555962 SMIM35A0A1B0GVV1 85 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 CTSHP09668 335 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 IQCF3P0C7M6 154 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 CSF2RAP15509 400 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 SELPP16109 830 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 THPOP40225 353 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 CCT6AP40227 531 aaKnown RBP10.02□□□□□ -0.81
CHD8-210ENST00000555962 DRP2Q13474 957 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 STK38Q15208 465 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 XKR9Q5GH70 373 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 SPECC1Q5M775 1068 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 TAF2Q6P1X5 1199 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 C16orf59Q7L2K0 433 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 KCNK18Q7Z418 384 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 KIAA0319LQ8IZA0 1049 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 LRRC71Q8N4P6 559 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 LINC01465Q8N7H1 131 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 LINC00301Q8NCQ3 95 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 ERMNQ8TAM6 284 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 CLIC6Q96NY7 704 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 PNMA5Q96PV4 448 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 RAB34Q9BZG1 259 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 FAM49AQ9H0Q0 323 aaPredicted RBP10.02□□□□□ -0.81
CHD8-210ENST00000555962 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
CHD8-210ENST00000555962 SRPRBQ9Y5M8 271 aaKnown RBP10.02□□□□□ -0.81
CHD8-210ENST00000555962 MORC2Q9Y6X9 1032 aaPredicted RBP10.02□□□□□ -0.81
CHD8-210ENST00000555962 IGKV6-21A0A0C4DH24 114 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 SPTLC2O15270 562 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 MAGEB2O15479 319 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 NBNO60934 754 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 MAFO75444 373 aaPredicted RBP10.01□□□□□ -0.81
CHD8-210ENST00000555962 YEATS4O95619 227 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 CHRNA1P02708 482 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 LONP1P36776 959 aaKnown RBP10.01□□□□□ -0.81
CHD8-210ENST00000555962 RARRES1P49788 294 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 CLCN3P51790 818 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 FPGSQ05932 587 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 MGAT3Q09327 533 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 TBC1D8BQ0IIM8 1120 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 TMEM62Q0P6H9 643 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 GRB10Q13322 594 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 FAM26DQ5JW98 314 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 KRT79Q5XKE5 535 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 HAUS3Q68CZ6 603 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 EFCAB12Q6NXP0 572 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 USP49Q70CQ1 688 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 RPAINQ86UA6 219 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 CCDC155Q8N6L0 562 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 METTL13Q8N6R0 699 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 LRRC15Q8TF66 581 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 EPSTI1Q96J88 318 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 CEP170P1Q96L14 293 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 NACC1Q96RE7 527 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 PLIN2Q99541 437 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 LBHD1Q9BQE6 289 aaPredicted RBP10.01□□□□□ -0.81
CHD8-210ENST00000555962 CSRNP2Q9H175 543 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 ANKEF1Q9NU02 776 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 DDX19AQ9NUU7 478 aaKnown RBP10.01□□□□□ -0.81
CHD8-210ENST00000555962 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
CHD8-210ENST00000555962 LAMA2P24043 3122 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms