RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 POLE2P56282 527 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 USP46P62068 366 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 IGBP1P78318 339 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 PTPN12Q05209 780 aaKnown RBP11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 VPS72Q15906 364 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 PCSK7Q16549 785 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 MEA1Q16626 185 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 TRIM68Q6AZZ1 485 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 NEPROQ6NW34 567 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 IRGCQ6NXR0 463 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 CCDC155Q8N6L0 562 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 NELFBQ8WX92 580 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 TYW1Q9NV66 732 aaKnown RBP11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 PCSK1NQ9UHG2 260 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 NOVA2Q9UNW9 492 aaKnown RBP11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 ARIH1Q9Y4X5 557 aaPredicted RBP11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 MYH10P35580 1976 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 UTYO14607 1347 aa11.16□□□□□ -0.62
EFCAB11-208ENST00000555872 RASSF10A6NK89 507 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 DCDC2CA8MYV0 355 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 RASA4BC9J798 803 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 USO1O60763 962 aaKnown RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ZNF254O75437 659 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 CD53P19397 219 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 PEX5P50542 639 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 KCNJ2P63252 427 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 NR5A1Q13285 461 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 MSLNQ13421 630 aaPredicted RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 HLTFQ14527 1009 aaKnown RBP eCLIP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ZNF268Q14587 947 aaPredicted RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ANKRD20A2Q5SQ80 823 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ANKRD20A1Q5TYW2 823 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ANKRD20A3Q5VUR7 823 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 NT5DC4Q86YG4 428 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ACMSDQ8TDX5 336 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 FRS2Q8WU20 508 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 CNKSR1Q969H4 720 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 GPR108Q9NPR9 543 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 COPRSQ9NQ92 184 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 RWDD2AQ9UIY3 292 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 GTF3C4Q9UKN8 822 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 SLC12A4Q9UP95 1085 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 SQORQ9Y6N5 450 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ZNF831Q5JPB2 1677 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 THSD7AQ9UPZ6 1657 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 PRAMEF22A3QJZ6 481 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 SPDYE5A6NIY4 337 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 C19orf81C9J6K1 198 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 LUC7L3O95232 432 aaKnown RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 IGKV5-2P06315 115 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 HNRNPCP07910 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 CTNNA1P35221 906 aaKnown RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 HSD17B3P37058 310 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 SLC39A6Q13433 755 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 BBS9Q3SYG4 887 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 RILPL1Q5EBL4 403 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ZNF746Q6NUN9 644 aaPredicted RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 SH3RF1Q7Z6J0 888 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 PCGF5Q86SE9 256 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ANKRD13CQ8N6S4 541 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ANKS4BQ8N8V4 417 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 LZICQ8WZA0 190 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ZNF653Q96CK0 615 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 CCDC42Q96M95 316 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 KRT12Q99456 494 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 IFIH1Q9BYX4 1025 aaKnown RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 CCSER1Q9C0I3 900 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 B3GNT4Q9C0J1 378 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 SEPT10Q9P0V9 454 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 XPO7Q9UIA9 1087 aaKnown RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 ANGEL1Q9UNK9 670 aaKnown RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 TMA7Q9Y2S6 64 aaKnown RBP11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 DAAM1Q9Y4D1 1078 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 NUP188Q5SRE5 1749 aa11.15□□□□□ -0.62
EFCAB11-208ENST00000555872 IFIT3O14879 490 aaKnown RBP11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 FOXP2O15409 715 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 HOXA2O43364 376 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 ORC4O43929 436 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 TBC1D12O60347 775 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 PLEKP08567 350 aaPredicted RBP11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 GSTT2P0CG29 244 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 GSTT2BP0CG30 244 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 COL6A1P12109 1028 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 CES1P23141 567 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 HOXC13P31276 330 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 TSPAN7P41732 249 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 SKIV2L2P42285 1042 aaKnown RBP11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 PIP4K2AP48426 406 aaPredicted RBP11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 KLK7P49862 253 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 RNASE9P60153 205 aaKnown RBP11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 TIMM10P62072 90 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 MXRA7P84157 204 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 ZNF844Q08AG5 666 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 PRKG1Q13976 671 aa11.15□□□□□ -0.63
EFCAB11-208ENST00000555872 TAF11Q15544 211 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms