RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 NACC1Q96RE7 527 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 GAS2L1Q99501 681 aaPredicted RBP13.49□□□□□ -0.25
SRP54-206ENST00000555317 INO80BQ9C086 356 aaPredicted RBP13.49□□□□□ -0.25
SRP54-206ENST00000555317 CDHR5Q9HBB8 845 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 LRFN2Q9ULH4 789 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 ST3GAL5Q9UNP4 418 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 TRANK1O15050 2925 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 TTC3P53804 2025 aa13.49□□□□□ -0.25
SRP54-206ENST00000555317 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.48□□□□□ -0.25
SRP54-206ENST00000555317 STAG3L1P0CL83 205 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 XRCC6P12956 609 aaKnown RBP eCLIP13.48□□□□□ -0.25
SRP54-206ENST00000555317 FOSL2P15408 326 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 ZSCAN20P17040 1043 aaPredicted RBP13.48□□□□□ -0.25
SRP54-206ENST00000555317 MUTP22033 750 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
SRP54-206ENST00000555317 RPA1P27694 616 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 ATP2C1P98194 919 aaPredicted RBP13.48□□□□□ -0.25
SRP54-206ENST00000555317 DRP2Q13474 957 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 ZNF410Q86VK4 478 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 C4orf32Q8N8J7 132 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 PIGOQ8TEQ8 1089 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 TMEM40Q8WWA1 233 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 TOP1MTQ969P6 601 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 TMEM143Q96AN5 459 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 CEP89Q96ST8 783 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 CDX2Q99626 313 aaPredicted RBP13.48□□□□□ -0.25
SRP54-206ENST00000555317 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
SRP54-206ENST00000555317 ADAMTS10Q9H324 1103 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 DHX33Q9H6R0 707 aaKnown RBP13.48□□□□□ -0.25
SRP54-206ENST00000555317 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 CDH23Q9H251 3354 aa13.48□□□□□ -0.25
SRP54-206ENST00000555317 ARHGEF35A5YM69 484 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 VWA3AA6NCI4 1184 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 ENPP3O14638 875 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 ZBTB39O15060 712 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 STX6O43752 255 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 USO1O60763 962 aaKnown RBP13.47□□□□□ -0.25
SRP54-206ENST00000555317 MED24O75448 989 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 DARSP14868 501 aaKnown RBP13.47□□□□□ -0.25
SRP54-206ENST00000555317 RARRES1P49788 294 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
SRP54-206ENST00000555317 TFDP1Q14186 410 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 MXD4Q14582 209 aaPredicted RBP13.47□□□□□ -0.25
SRP54-206ENST00000555317 GRIN2CQ14957 1233 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 ZRSR1Q15695 479 aaKnown RBP13.47□□□□□ -0.25
SRP54-206ENST00000555317 ARL6IP4Q66PJ3 421 aaKnown RBP13.47□□□□□ -0.25
SRP54-206ENST00000555317 FAM228AQ86W67 206 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 IGSF22Q8N9C0 903 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
SRP54-206ENST00000555317 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 GUCD1Q96NT3 240 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 C1orf112Q9NSG2 853 aa13.47□□□□□ -0.25
SRP54-206ENST00000555317 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
SRP54-206ENST00000555317 A0A087WZ62 844 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 RBAK-RBAKDNI3L0D1 243 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 ASAP2O43150 1006 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 SRGAP2CP0DJJ0 459 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.25
SRP54-206ENST00000555317 PHKA2P46019 1235 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 LAMTOR4Q0VGL1 99 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 CATSPER4Q7RTX7 472 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 NPAS4Q8IUM7 802 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 MCPH1Q8NEM0 835 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 RASSF8Q8NHQ8 419 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 PRPF31Q8WWY3 499 aaKnown RBP13.46□□□□□ -0.25
SRP54-206ENST00000555317 MYLIPQ8WY64 445 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 ARNTL2Q8WYA1 636 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 ADAM2Q99965 735 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 FDXACB1Q9BRP7 624 aaPredicted RBP13.46□□□□□ -0.25
SRP54-206ENST00000555317 PRDM12Q9H4Q4 367 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 ZSCAN16Q9H4T2 348 aaPredicted RBP13.46□□□□□ -0.25
SRP54-206ENST00000555317 DDX19AQ9NUU7 478 aaKnown RBP13.46□□□□□ -0.25
SRP54-206ENST00000555317 DACT1Q9NYF0 836 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.25
SRP54-206ENST00000555317 LCHNA4D1U4 455 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 SARSP49591 514 aaKnown RBP13.45□□□□□ -0.26
SRP54-206ENST00000555317 TAP1Q03518 808 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 SF3A1Q15459 793 aaKnown RBP13.45□□□□□ -0.26
SRP54-206ENST00000555317 SLC24A5Q71RS6 500 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 KSR1Q8IVT5 923 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 RNF149Q8NC42 400 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 LINC01599Q8WXQ3 324 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 TGS1Q96RS0 853 aaKnown RBP13.45□□□□□ -0.26
SRP54-206ENST00000555317 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
SRP54-206ENST00000555317 TMX1Q9H3N1 280 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 CERS4Q9HA82 394 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 DNM3Q9UQ16 869 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 MTMR6Q9Y217 621 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 PCDHB7Q9Y5E2 793 aa13.45□□□□□ -0.26
SRP54-206ENST00000555317 COL6A3P12111 3177 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 ADGRA3Q8IWK6 1321 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 A0A087WWV3 80 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms