RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 ERICH2A1L162 156 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 SPDYE3A6NKU9 549 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 ZBTB42B2RXF5 422 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 ATG7O95352 703 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 VTNP04004 478 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 DCNP07585 359 aaKnown RBP11□□□□□ -0.65
SCFD1-215ENST00000555259 CTSAP10619 480 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 GIT2Q14161 759 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 UBE2SQ16763 222 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 LETM2Q2VYF4 491 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 SPECC1Q5M775 1068 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 TMEM173Q86WV6 379 aaPredicted RBP11□□□□□ -0.65
SCFD1-215ENST00000555259 RNF169Q8NCN4 708 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 RSAD2Q8WXG1 361 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 DIAPH3Q9NSV4 1193 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 DLGAP2Q9P1A6 1054 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 SEC63Q9UGP8 760 aaKnown RBP11□□□□□ -0.65
SCFD1-215ENST00000555259 CA14Q9ULX7 337 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 USP24Q9UPU5 2620 aa11□□□□□ -0.65
SCFD1-215ENST00000555259 EVPLQ92817 2033 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 CACNA1IQ9P0X4 2223 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 SPDYE4A6NLX3 237 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 N4BP1O75113 896 aaKnown RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 ZSCAN20P17040 1043 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 POLGP54098 1239 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 TRDNQ13061 729 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 ITGB3BPQ13352 177 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 WTAPQ15007 396 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 ST3GAL2Q16842 350 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 ZNF484Q5JVG2 852 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 CATIPQ7Z7H3 387 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 PPFIBP1Q86W92 1011 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 C1orf210Q8IVY1 113 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 HELQQ8TDG4 1101 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 MXRA8Q9BRK3 442 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 MRPL9Q9BYD2 267 aaKnown RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 PCDHA6Q9UN73 950 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 PCDHA8Q9Y5H6 950 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 A0A0U1RQF3 1178 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 BACH1O14867 736 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 C22orf31O95567 290 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 CCNE2O96020 404 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 SDHBP21912 280 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 ATXN1P54253 815 aaKnown RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 C15orf39Q6ZRI6 1047 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 DDX53Q86TM3 631 aaKnown RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 ZNF598Q86UK7 904 aaKnown RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 CCDC60Q8IWA6 550 aaPredicted RBP10.99□□□□□ -0.65
SCFD1-215ENST00000555259 SIT1Q9Y3P8 196 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
SCFD1-215ENST00000555259 BAHCC1Q9P281 2608 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 POTEMA6NI47 508 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 KINO60870 393 aaKnown RBP10.98□□□□□ -0.65
SCFD1-215ENST00000555259 ZC3H11AO75152 810 aaKnown RBP eCLIP10.98□□□□□ -0.65
SCFD1-215ENST00000555259 SRFP11831 508 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 SMARCA1P28370 1054 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 SART3Q15020 963 aaKnown RBP10.98□□□□□ -0.65
SCFD1-215ENST00000555259 NONOQ15233 471 aaKnown RBP eCLIP10.98□□□□□ -0.65
SCFD1-215ENST00000555259 PTPN14Q15678 1187 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 KIAA0319Q5VV43 1072 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 PHLDB3Q6NSJ2 640 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 PDXDC2PQ6P474 469 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 POTEGQ6S5H5 508 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 ABHD15Q6UXT9 468 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 SLC44A3Q8N4M1 653 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 METTL13Q8N6R0 699 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 GPR152Q8TDT2 470 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 BCL7CQ8WUZ0 217 aaPredicted RBP10.98□□□□□ -0.65
SCFD1-215ENST00000555259 IGSF21Q96ID5 467 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 LNPKQ9C0E8 428 aa10.98□□□□□ -0.65
SCFD1-215ENST00000555259 AGO4Q9HCK5 861 aaKnown RBP10.98□□□□□ -0.65
SCFD1-215ENST00000555259 ASPMQ8IZT6 3477 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 HIP1O00291 1037 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 GLULP15104 373 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 ATP4AP20648 1035 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 EIF4BP23588 611 aaKnown RBP10.97□□□□□ -0.65
SCFD1-215ENST00000555259 GBP2P32456 591 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-215ENST00000555259 CLCN4P51793 760 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 NLRP11P59045 1033 aaKnown RBP10.97□□□□□ -0.65
SCFD1-215ENST00000555259 VARS2Q5ST30 1063 aaKnown RBP10.97□□□□□ -0.65
SCFD1-215ENST00000555259 MAML2Q8IZL2 1156 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-215ENST00000555259 CTCFLQ8NI51 663 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-215ENST00000555259 MAP3K14Q99558 947 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 MYL10Q9BUA6 226 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 IL25Q9H293 177 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 ZNF302Q9NR11 478 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 ARHGEF3Q9NR81 526 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 NCDNQ9UBB6 729 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 EPS15L1Q9UBC2 864 aa10.97□□□□□ -0.65
SCFD1-215ENST00000555259 DDX39AO00148 427 aaKnown RBP10.96□□□□□ -0.65
SCFD1-215ENST00000555259 PLEKHA8P1O95397 391 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 CNPP09543 421 aaKnown RBP10.96□□□□□ -0.65
SCFD1-215ENST00000555259 KLRC2P26717 231 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 KIF5BP33176 963 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 CLCN3P51790 818 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 CEP55Q53EZ4 464 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 SRBD1Q8N5C6 995 aaKnown RBP10.96□□□□□ -0.65
SCFD1-215ENST00000555259 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
SCFD1-215ENST00000555259 CMASQ8NFW8 434 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms