RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TANGO6Q9C0B7 1094 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 STMN4Q9H169 189 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 SUCLA2Q9P2R7 463 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 KIAA1024Q9UPX6 916 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 UTP11Q9Y3A2 253 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 FRMD3A2A2Y4 597 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 CCDC169A6NNP5 214 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 ZNF131P52739 623 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 NFIAQ12857 509 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 LRRC41Q15345 812 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 HIBCHQ6NVY1 386 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 GPBP1Q86WP2 473 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 FAM20AQ96MK3 541 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 PLCD4Q9BRC7 762 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 MXD3Q9BW11 206 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 LSM14BQ9BX40 385 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 HOMER3Q9NSC5 361 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 SAMD15Q9P1V8 674 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 C15orf41Q9Y2V0 281 aa11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 NOC2LQ9Y3T9 749 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-210ENST00000555252 A0A087X0T9 212 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 NKRFO15226 690 aaKnown RBP eCLIP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 CEP104O60308 925 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 GFPT2O94808 682 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 SSBP05455 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 KRT18P05783 430 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 FAM228BP0C875 321 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 PRKCIP41743 596 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 MMP13P45452 471 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 GRIK3Q13003 919 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 PPP1R7Q15435 360 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 TRADDQ15628 312 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 HERC4Q5GLZ8 1057 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 TRIM59Q8IWR1 403 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 CRYGNQ8WXF5 182 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 TMEM109Q9BVC6 243 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 DNAJC18Q9H819 358 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 NLRC4Q9NPP4 1024 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 NOP53Q9NZM5 478 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 SERPINA10Q9UK55 444 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 PCDHA2Q9Y5H9 948 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L15C9J2P7 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L13C9JLJ4 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L11C9JVI0 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L18D6R9N7 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L22D6RA61 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L17D6RBQ6 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L19D6RCP7 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L20D6RJB6 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 E9PMD0 336 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 KRIT1O00522 736 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 CETN3O15182 167 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 CTNND1O60716 968 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 NEBLO76041 1014 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 CYP11B2P19099 503 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 DRG2P55039 364 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 POLR2FP61218 127 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 ARHGAP4P98171 946 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L24Q0WX57 530 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 E2F5Q15329 346 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 USP17L6PQ6QN14 398 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 BTNL9Q6UXG8 535 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 OR2W6PQ8NHA6 318 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 NAP1L3Q99457 506 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 NEUROG2Q9H2A3 272 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 GANQ9H2C0 597 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 POLD4Q9HCU8 107 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 EMILIN3Q9NT22 766 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 CNOT7Q9UIV1 285 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 STXBP5LQ9Y2K9 1186 aa11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.59□□□□□ -0.55
MTHFD1-210ENST00000555252 COL2A1P02458 1487 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 FAM187AA6NFU0 413 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 MEIS2O14770 477 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 FLOT1O75955 427 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 AGTP01019 485 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 CCND1P24385 295 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 SLC12A3P55017 1021 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 DHX9Q08211 1270 aaKnown RBP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 RAPGEF1Q13905 1077 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 NAA25Q14CX7 972 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 FBXO11Q86XK2 927 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 METTL13Q8N6R0 699 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 FMO2Q99518 471 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 KCTD10Q9H3F6 313 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 BAIAP2L1Q9UHR4 511 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 NENFQ9UMX5 172 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 DNM3Q9UQ16 869 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 POTEB3A0JP26 581 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 SPDYE3A6NKU9 549 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 PHF20L1A8MW92 1017 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 POTECB2RU33 542 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 F5H6K3 240 aa11.58□□□□□ -0.56
MTHFD1-210ENST00000555252 ENTPD3O75355 529 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms