RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CRYBB1P53674 252 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-206ENST00000555046 CEBPZQ03701 1054 aaKnown RBP11.8□□□□□ -0.52
TMEM260-206ENST00000555046 MXD4Q14582 209 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-206ENST00000555046 STK38Q15208 465 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 TMEM240Q5SV17 173 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 CNKSR3Q6P9H4 555 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 ZNF365Q70YC5 407 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 DEFB128Q7Z7B8 93 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 KRI1Q8N9T8 703 aaKnown RBP11.8□□□□□ -0.52
TMEM260-206ENST00000555046 RASSF8Q8NHQ8 419 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 KCNG4Q8TDN1 519 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 TRAPPC12Q8WVT3 735 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 HERVK_113Q902F9 699 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 SUCLA2Q9P2R7 463 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-206ENST00000555046 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 TRPV2Q9Y5S1 764 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 CHD8Q9HCK8 2581 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 MYH7BA7E2Y1 1941 aa11.8□□□□□ -0.52
TMEM260-206ENST00000555046 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-206ENST00000555046 SPTLC2O15270 562 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 PPP6R2O75170 966 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 MED24O75448 989 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 ACRP10323 421 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 BMP1P13497 986 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 RARRES1P49788 294 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 NPEPPSP55786 919 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 FOXK2Q01167 660 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 NCBP1Q09161 790 aaKnown RBP11.79□□□□□ -0.52
TMEM260-206ENST00000555046 PTPAQ15257 358 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 IL17AQ16552 155 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
TMEM260-206ENST00000555046 LINC00301Q8NCQ3 95 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 MCPH1Q8NEM0 835 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 PHOSPHO2Q8TCD6 241 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 PSPC1Q8WXF1 523 aaKnown RBP11.79□□□□□ -0.52
TMEM260-206ENST00000555046 KHSRPQ92945 711 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM260-206ENST00000555046 RNPC3Q96LT9 517 aaKnown RBP11.79□□□□□ -0.52
TMEM260-206ENST00000555046 SCLT1Q96NL6 688 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 USP28Q96RU2 1077 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 MTRQ99707 1265 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 FTHL17Q9BXU8 183 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 GCOM2Q9BZD3 368 aaPredicted RBP11.79□□□□□ -0.52
TMEM260-206ENST00000555046 DHX33Q9H6R0 707 aaKnown RBP11.79□□□□□ -0.52
TMEM260-206ENST00000555046 ATP6V0A4Q9HBG4 840 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 CDY2AQ9Y6F7 541 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 SLC4A7Q9Y6M7 1214 aa11.79□□□□□ -0.52
TMEM260-206ENST00000555046 TRANK1O15050 2925 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 NBNO60934 754 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 EYA4O95677 639 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 CTSHP09668 335 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 MARCKSP29966 332 aaPredicted RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 KCNJ6P48051 423 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 NLRP11P59045 1033 aaKnown RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 KRT85P78386 507 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 POU5F1BQ06416 359 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 TFDP1Q14186 410 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 PCBP1Q15365 356 aaKnown RBP eCLIP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 ZRSR1Q15695 479 aaKnown RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 PLEKHG4Q58EX7 1191 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 HYIQ5T013 277 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 FOXD4L5Q5VV16 416 aaPredicted RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 PLA2G4FQ68DD2 849 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 TSHZ1Q6ZSZ6 1077 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 C16orf59Q7L2K0 433 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 CABP7Q86V35 215 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 ZNF410Q86VK4 478 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 PIGOQ8TEQ8 1089 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 FOXD4L4Q8WXT5 416 aaPredicted RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 WNT8BQ93098 351 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 CEP89Q96ST8 783 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 TIPINQ9BVW5 301 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 CCSER1Q9C0I3 900 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 SCAND2PQ9GZW5 306 aaPredicted RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 DDX19AQ9NUU7 478 aaKnown RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 KCND2Q9NZV8 630 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 WRAP73Q9P2S5 460 aaPredicted RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 TFIP11Q9UBB9 837 aaKnown RBP11.78□□□□□ -0.52
TMEM260-206ENST00000555046 GINS2Q9Y248 185 aa11.78□□□□□ -0.52
TMEM260-206ENST00000555046 ZBBXA8MT70 800 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 CUTAO60888 179 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 GPR32O75388 356 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 RPS6KA5O75582 802 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 CYP11B2P19099 503 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 EIF4BP23588 611 aaKnown RBP11.77□□□□□ -0.53
TMEM260-206ENST00000555046 CLCN3P51790 818 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 MGAT3Q09327 533 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 PAK2Q13177 524 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 EMC2Q15006 297 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 FBXO47Q5MNV8 452 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 OTOP2Q7RTS6 562 aa11.77□□□□□ -0.53
TMEM260-206ENST00000555046 LRRC71Q8N4P6 559 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms