RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 UNC79Q9P2D8 2635 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 LOC285556D6RIA3 1793 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 LOC100289279A0A1B0GTE1 492 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 TSPY2A6NKD2 308 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 FGAP02671 866 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 ZNF865P0CJ78 1059 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 HSPD1P10809 573 aaKnown RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 EEF2P13639 858 aaKnown RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 RAB6AP20340 208 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 MAPK4P31152 587 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 VCPP55072 806 aaKnown RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 BACE1P56817 501 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 IKQ13123 557 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 GRB10Q13322 594 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 PLS1Q14651 629 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 SBK1Q52WX2 424 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 PRAMEF19Q5SWL8 479 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 GIMAP6Q6P9H5 292 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 CCDC174Q6PII3 467 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 CASC1Q6TDU7 716 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 MFSD6Q6ZSS7 791 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 TMEM179Q6ZVK1 233 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 C16orf86Q6ZW13 317 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 ZNF765Q7L2R6 523 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 ZNF589Q86UQ0 364 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 SUGP1Q8IWZ8 645 aaKnown RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 GPRC5AQ8NFJ5 357 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 NPLOC4Q8TAT6 608 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 GDPD5Q8WTR4 605 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 PBXIP1Q96AQ6 731 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 CALR3Q96L12 384 aaKnown RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 SLC38A3Q99624 504 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 TANGO6Q9C0B7 1094 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 EHD4Q9H223 541 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 DNAJC18Q9H819 358 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 ALG13Q9NP73 1137 aaKnown RBP5.47□□□□□ -1.53
ATXN3-231ENST00000554994 CNTN3Q9P232 1028 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 TBX21Q9UL17 535 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 ZNF536O15090 1300 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 SPTBN2O15020 2390 aa5.47□□□□□ -1.53
ATXN3-231ENST00000554994 RFX7Q2KHR2 1363 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 A0A1W2PQ45 241 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 A0A1W2PQY0 241 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 DCDC2CA8MYV0 355 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 H3BQ06 376 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 TNFRSF10BO14763 440 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 DLGAP3O95886 979 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 PGK1P00558 417 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 GSPT1P15170 499 aaKnown RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 POU3F3P20264 500 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 CHMLP26374 656 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 CYP2C18P33260 490 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 USP14P54578 494 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 HERVK_113P62684 666 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 ERVK-24P63145 666 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 ICA1Q05084 483 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 ZP2Q05996 745 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 IKBKEQ14164 716 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 IMMTQ16891 758 aaKnown RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 LEXMQ3ZCV2 418 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 ZNF438Q7Z4V0 828 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 ADSSL1Q8N142 457 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 C2CD4AQ8NCU7 369 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 FAM168AQ92567 244 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 ARID3AQ99856 593 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 ZKSCAN3Q9BRR0 538 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 WDR18Q9BV38 432 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 RPAP3Q9H6T3 665 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 KANSL2Q9H9L4 492 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 EPB41L4AQ9HCS5 686 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 GINM1Q9NU53 330 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 RBPJLQ9UBG7 517 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 SOX13Q9UN79 622 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 STX8Q9UNK0 236 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 PCDHA11Q9Y5I1 949 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 USP24Q9UPU5 2620 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 COL4A4P53420 1690 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-231ENST00000554994 TRANK1O15050 2925 aa5.46□□□□□ -1.54
ATXN3-231ENST00000554994 KMT2EQ8IZD2 1858 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 A0A1W2PRG0 241 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 TMEM221A6NGB7 291 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 M0R296 226 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 NMT2O60551 498 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 LPXNO60711 386 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 FLOT1O75955 427 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 FGBP02675 491 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 NFICP08651 508 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 ATP2A2P16615 1042 aaKnown RBP5.45□□□□□ -1.54
ATXN3-231ENST00000554994 RFX1P22670 979 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 GUCY1A2P33402 732 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 PTH1RQ03431 593 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 GABPAQ06546 454 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 TRDNQ13061 729 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 ALX1Q15699 326 aa5.45□□□□□ -1.54
ATXN3-231ENST00000554994 CAPN12Q6ZSI9 719 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms