RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 TMEM59LQ9UK28 342 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 PPP1R9AQ9ULJ8 1098 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 ASTN1O14525 1302 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 BTNL10A8MVZ5 291 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 PHF20L1A8MW92 1017 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 DDX39AO00148 427 aaKnown RBP10.31□□□□□ -0.76
SYNE2-213ENST00000554805 CES2O00748 559 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 EYA4O95677 639 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 FOSP01100 380 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-213ENST00000554805 BRD2P25440 801 aaKnown RBP10.31□□□□□ -0.76
SYNE2-213ENST00000554805 PRKCIP41743 596 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 ODR4Q5SWX8 454 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 SYDE2Q5VT97 1194 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 TAX1BP1Q86VP1 789 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 LNX1Q8TBB1 728 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-213ENST00000554805 ETNPPLQ8TBG4 499 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 FRMD3A2A2Y4 597 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 GAP43P17677 238 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 CRKP46108 304 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 LRCH2Q5VUJ6 765 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 RINT1Q6NUQ1 792 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 CCDC174Q6PII3 467 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 CCDC25Q86WR0 208 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 RFFLQ8WZ73 363 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 PCIF1Q9H4Z3 704 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 PARVGQ9HBI0 331 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 CHORDC1Q9UHD1 332 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-213ENST00000554805 NR2E1Q9Y466 385 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 PCDHAC2Q9Y5I4 1007 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 PLIN4Q96Q06 1357 aa10.31□□□□□ -0.76
SYNE2-213ENST00000554805 SLC16A3O15427 465 aaKnown RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 FMO5P49326 533 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 MYL7Q01449 175 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 ABCB5Q2M3G0 1257 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 DEFB132Q7Z7B7 95 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 NAP1L3Q99457 506 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 P2RX7Q99572 595 aaKnown RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 INTS2Q9H0H0 1204 aaKnown RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 SIX2Q9NPC8 291 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 RASAL2Q9UJF2 1139 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 NAV1Q8NEY1 1877 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 CYP3A7-CYP3A51PA0A087WV96 503 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 DDTLA6NHG4 134 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 DCDC2CA8MYV0 355 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 CTNND1O60716 968 aaKnown RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 GAS7O60861 476 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 NDUFB10O96000 172 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 GYS1P13807 737 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 CYP3A7P24462 503 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 MMP14P50281 582 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 IRX3P78415 501 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 DENND2CQ68D51 928 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 ZNF746Q6NUN9 644 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 TMC3Q7Z5M5 1100 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 RAPGEF5Q92565 580 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 HOOK2Q96ED9 719 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 PSMD1Q99460 953 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 STK33Q9BYT3 514 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 CNOT8Q9UFF9 292 aaKnown RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 MYH1P12882 1939 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 TBX3O15119 743 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 BMP3P12645 472 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 ECHS1P30084 290 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 MESDQ14696 234 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 GKAP1Q5VSY0 366 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 HOOK3Q86VS8 718 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 SUGP1Q8IWZ8 645 aaKnown RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 ARHGEF26Q96DR7 871 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 JPH2Q9BR39 696 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 THAP2Q9H0W7 228 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 UBE2TQ9NPD8 197 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-213ENST00000554805 TAS2R14Q9NYV8 317 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 STK24Q9Y6E0 443 aa10.3□□□□□ -0.76
SYNE2-213ENST00000554805 COL16A1Q07092 1604 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-213ENST00000554805 ARHGEF35A5YM69 484 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 F8VZ95 297 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 TGFB1I1O43294 461 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 SLCO1A2P46721 670 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 SPIRE1Q08AE8 756 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 CRY2Q49AN0 593 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 TBC1D10BQ4KMP7 808 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-213ENST00000554805 AGBL2Q5U5Z8 902 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 APOBEC3HQ6NTF7 200 aaKnown RBP10.29□□□□□ -0.76
SYNE2-213ENST00000554805 AADACL2Q6P093 401 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 EPM2AIP1Q7L775 607 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-213ENST00000554805 CCDC91Q7Z6B0 441 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 CEP57Q86XR8 500 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 ZC3H3Q8IXZ2 948 aaKnown RBP10.29□□□□□ -0.76
SYNE2-213ENST00000554805 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 PI4KBQ9UBF8 816 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 DDX20Q9UHI6 824 aaKnown RBP10.29□□□□□ -0.76
SYNE2-213ENST00000554805 RGS16O15492 202 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-213ENST00000554805 SLC26A4O43511 780 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 CLSTN1O94985 981 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 GH2P01242 217 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 TMEM253P0C7T8 217 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 ANXA13P27216 316 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 CETN1Q12798 172 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms