RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 FAM217BQ9NTX9 383 aaPredicted RBP7.61□□□□□ -1.19
PCNX4-208ENST00000554534 TMEM161AQ9NX61 479 aa7.61□□□□□ -1.19
PCNX4-208ENST00000554534 SPG21Q9NZD8 308 aa7.61□□□□□ -1.19
PCNX4-208ENST00000554534 PUF60Q9UHX1 559 aaKnown RBP7.61□□□□□ -1.19
PCNX4-208ENST00000554534 INPP5FQ9Y2H2 1132 aa7.61□□□□□ -1.19
PCNX4-208ENST00000554534 SAMM50Q9Y512 469 aa7.61□□□□□ -1.19
PCNX4-208ENST00000554534 HCFC2Q9Y5Z7 792 aa7.61□□□□□ -1.19
PCNX4-208ENST00000554534 SQORQ9Y6N5 450 aa7.61□□□□□ -1.19
PCNX4-208ENST00000554534 FRYLO94915 3013 aa7.61□□□□□ -1.19
PCNX4-208ENST00000554534 KDM3AQ9Y4C1 1321 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 IGLV3-22A0A075B6J6 115 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 KLF18A0A0U1RQI7 1052 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 IPO5O00410 1097 aaKnown RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 MAFGO15525 162 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 GALR2O43603 387 aaPredicted RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 NARSO43776 548 aaKnown RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 EDIL3O43854 480 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 ZNF862O60290 1169 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 SPATA31D3P0C874 917 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 ATF7P17544 494 aaPredicted RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 LAG3P18627 525 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 SMARCA1P28370 1054 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 AFF1P51825 1210 aaKnown RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 BCAR1P56945 870 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 UBE3AQ05086 875 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 FUT2Q10981 343 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 NECTIN1Q15223 517 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 RTN1Q16799 776 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 PRR16Q569H4 304 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 MIS18BP1Q6P0N0 1132 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 SPATA31D4Q6ZUB0 917 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 ABI1Q8IZP0 508 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 VPS52Q8N1B4 723 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 SLC39A11Q8N1S5 342 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 MRPL43Q8N983 215 aaKnown RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 PHKBQ93100 1093 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 TMEM87BQ96K49 555 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 SCLT1Q96NL6 688 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 LARP6Q9BRS8 491 aaKnown RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 TMEM117Q9H0C3 514 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 ANO2Q9NQ90 1003 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 C1orf112Q9NSG2 853 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 BMP2KQ9NSY1 1161 aaPredicted RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 DNAJB4Q9UDY4 337 aa7.6□□□□□ -1.19
PCNX4-208ENST00000554534 DBR1Q9UK59 544 aaKnown RBP7.6□□□□□ -1.19
PCNX4-208ENST00000554534 C2orf16Q68DN1 1984 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.59□□□□□ -1.19
PCNX4-208ENST00000554534 PRR23AA6NEV1 266 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 GOLGA8AA7E2F4 631 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 GOLGA8BA8MQT2 603 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 STK25O00506 426 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 C2CD2LO14523 706 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 ZBTB43O43298 467 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 ZC3H11AO75152 810 aaKnown RBP eCLIP7.59□□□□□ -1.19
PCNX4-208ENST00000554534 ZSCAN20P17040 1043 aaPredicted RBP7.59□□□□□ -1.19
PCNX4-208ENST00000554534 SREBF1P36956 1147 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 LIFRP42702 1097 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 CLK2P49760 499 aaKnown RBP7.59□□□□□ -1.19
PCNX4-208ENST00000554534 PLCB3Q01970 1234 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 KRT17Q04695 432 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 SMC1AQ14683 1233 aaKnown RBP7.59□□□□□ -1.19
PCNX4-208ENST00000554534 MTERF2Q49AM1 385 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 CES5AQ6NT32 575 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 APOA5Q6Q788 366 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 TMEM184AQ6ZMB5 413 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 SYNE3Q6ZMZ3 975 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 TAS1R1Q7RTX1 841 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 ZNF280BQ86YH2 543 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 TMTC2Q8N394 836 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 NLRP7Q8WX94 980 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 RIN2Q8WYP3 895 aaPredicted RBP7.59□□□□□ -1.19
PCNX4-208ENST00000554534 RABGGTAQ92696 567 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 ESYT1Q9BSJ8 1104 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 VN1R3Q9BXE9 311 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 MFSD1Q9H3U5 465 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 SORCS3Q9UPU3 1222 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 MAFBQ9Y5Q3 323 aaPredicted RBP7.59□□□□□ -1.19
PCNX4-208ENST00000554534 ZNF292O60281 2723 aa7.59□□□□□ -1.19
PCNX4-208ENST00000554534 COL4A3Q01955 1670 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 DOCK6Q96HP0 2047 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 A0A087WZ62 844 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 SPDYE4A6NLX3 237 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 F8W810 466 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 PSAPP07602 524 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 CFHP08603 1231 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 NPR3P17342 541 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 EIF4BP23588 611 aaKnown RBP7.58□□□□□ -1.2
PCNX4-208ENST00000554534 GPC3P51654 580 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 EXOSC10Q01780 885 aaKnown RBP7.58□□□□□ -1.2
PCNX4-208ENST00000554534 MTMR3Q13615 1198 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 SPECC1Q5M775 1068 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 ASTLQ6HA08 431 aaPredicted RBP7.58□□□□□ -1.2
PCNX4-208ENST00000554534 ADSSL1Q8N142 457 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 ZNF579Q8NAF0 562 aaKnown RBP7.58□□□□□ -1.2
PCNX4-208ENST00000554534 TMEM87AQ8NBN3 555 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 SLC22A17Q8WUG5 538 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 CASP10Q92851 521 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 TNPO1Q92973 898 aaKnown RBP7.58□□□□□ -1.2
PCNX4-208ENST00000554534 B3GALT6Q96L58 329 aa7.58□□□□□ -1.2
PCNX4-208ENST00000554534 CDCA3Q99618 268 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms