RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 STK24Q9Y6E0 443 aa17.08■□□□□ 0.32
ARHGEF40-203ENST00000554514 EXOC3O60645 756 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 ENTPD3O75355 529 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 CEP55Q53EZ4 464 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 TRIM31Q9BZY9 425 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 GOPCQ9HD26 462 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 TUFT1Q9NNX1 390 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 AMACRQ9UHK6 382 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 VGLL3A8MV65 326 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 PGRMC1O00264 195 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 PRKCIP41743 596 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 OR2W6PQ8NHA6 318 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 RASSF4Q9H2L5 321 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 AGPAT3Q9NRZ7 376 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 SAMM50Q9Y512 469 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 ARHGEF35A5YM69 484 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 F8VZ95 297 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 FERP16591 822 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 SOX5P35711 763 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 ZNF720Q7Z2F6 126 aa17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 CELF4Q9BZC1 486 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-203ENST00000554514 SART1O43290 800 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 COPB2P35606 906 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 SLC5A5Q92911 643 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 BORCS6Q96GS4 357 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 TAS2R14Q9NYV8 317 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 PLAAQ9Y263 795 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 K7ENM7 598 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 HIP1RO75146 1068 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 CEP85LQ5SZL2 805 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 PIK3R5Q8WYR1 880 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 PBKQ96KB5 322 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 NACC1Q96RE7 527 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 TMEM39BQ9GZU3 492 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 INTS2Q9H0H0 1204 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 DPH5Q9H2P9 285 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 HOMER2Q9NSB8 354 aa17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 CHORDC1Q9UHD1 332 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-203ENST00000554514 IPO5O00410 1097 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 HPDP32754 393 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 USP8P40818 1118 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 MYL7Q01449 175 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 PPP2R5CQ13362 524 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 PALB2Q86YC2 1186 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 SLC35G2Q8TBE7 412 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.05■□□□□ 0.322e-8■■■□□ 14.7
ARHGEF40-203ENST00000554514 TAF1DQ9H5J8 278 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 BTNL10A8MVZ5 291 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 BUB1BO60566 1050 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 SHOX2O60902 331 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 DLG4P78352 724 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 LDHDQ86WU2 507 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 IQCKQ8N0W5 287 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 FIZ1Q96SL8 496 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 TEKT3Q9BXF9 490 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 NEUROG2Q9H2A3 272 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 TMX2Q9Y320 296 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 ATAD5Q96QE3 1844 aa17.05■□□□□ 0.32
ARHGEF40-203ENST00000554514 ATRNL1Q5VV63 1379 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 TMEM150BA6NC51 233 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 FKBP1AP62942 108 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 GUCY1A3Q02108 690 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 ZNF211Q13398 564 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 CPXCR1Q8N123 301 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 LMBR1Q8WVP7 490 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 ARHGEF26Q96DR7 871 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 BCCIPQ9P287 314 aaKnown RBP eCLIP17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 PPP1R9AQ9ULJ8 1098 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 TMEM110-MUSTN1A8MSY1 372 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 EIF3HO15372 352 aaKnown RBP eCLIP17.04■□□□□ 0.326e-8■■■□□ 16.4
ARHGEF40-203ENST00000554514 TTI1O43156 1089 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 TNFAIP3P21580 790 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 DLGAP5Q15398 846 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 NT5DC3Q86UY8 548 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 CTNNBL1Q8WYA6 563 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 TMEM59LQ9UK28 342 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 AMFRQ9UKV5 643 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 MRPL11Q9Y3B7 192 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
ARHGEF40-203ENST00000554514 DAPK3O43293 454 aa17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 FGGP02679 453 aa17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 ZSWIM2Q8NEG5 633 aa17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 ACTRT1Q8TDG2 376 aa17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 WHAMMQ8TF30 809 aa17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 SCFD2Q8WU76 684 aa17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 CHURC1Q8WUH1 139 aa17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 UBLCP1Q8WVY7 318 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 RNPC3Q96LT9 517 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 STK33Q9BYT3 514 aa17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-203ENST00000554514 VIL1P09327 827 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms