RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 HDAC9Q9UKV0 1011 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 AFF2P51816 1311 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 SHBGP04278 402 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 CYP11B2P19099 503 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 ADCY2Q08462 1091 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 SFR1Q86XK3 245 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 RDH13Q8NBN7 331 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 RIOX1Q9H6W3 641 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 PSTPIP2Q9H939 334 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 NARFQ9UHQ1 456 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 CCDC88AQ3V6T2 1871 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 LRRN2O75325 713 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 UBOX5O94941 541 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 VIMP08670 466 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 EIF3BP55884 814 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 PLS1Q14651 629 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 TMEM119Q4V9L6 283 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 ZNF804AQ7Z570 1209 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 SPICE1Q8N0Z3 855 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 RAB34Q9BZG1 259 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 ADAM7Q9H2U9 754 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 TLDC2A0PJX2 215 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 CCDC188H7C350 402 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 ALKBH5Q6P6C2 394 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 ZFPM1Q8IX07 1006 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 SPDYE1Q8NFV5 336 aaPredicted RBP18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 CCDC26Q8TAB7 109 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 ELMO3Q96BJ8 720 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 PRMT1Q99873 361 aaKnown RBP18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 GANQ9H2C0 597 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 BMP2KQ9NSY1 1161 aaPredicted RBP18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 RREB1Q92766 1687 aa18.34■□□□□ 0.53
PPP4R3A-202ENST00000554390 AKAP3O75969 853 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 UCHL3P15374 230 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 HOXA13P31271 388 aaPredicted RBP18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 MMP13P45452 471 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 NCALDP61601 193 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 DAAM2Q86T65 1068 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 HOOK3Q86VS8 718 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 PIGOQ8TEQ8 1089 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 YIPF3Q9GZM5 350 aa18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 CORO1CQ9ULV4 474 aaPredicted RBP18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 UTP11Q9Y3A2 253 aaKnown RBP18.33■□□□□ 0.53
PPP4R3A-202ENST00000554390 RARAP10276 462 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 CCND1P24385 295 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 UBXN2AP68543 259 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 FMO2Q99518 471 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 NYXQ9GZU5 481 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 KCTD10Q9H3F6 313 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 GOPCQ9HD26 462 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 FAM114A2Q9NRY5 505 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 INTS9Q9NV88 658 aaKnown RBP18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 A8MUI8 341 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 CHMP2AO43633 222 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 PPFIA2O75334 1257 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 IRF2BP2Q7Z5L9 587 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 ERICH1Q86X53 443 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 SLITRK6Q9H5Y7 841 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 HOMER3Q9NSC5 361 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 RGL1Q9NZL6 768 aa18.33■□□□□ 0.52
PPP4R3A-202ENST00000554390 IGF2BP3O00425 579 aaKnown RBP eCLIP18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 ZBTB48P10074 688 aaPredicted RBP18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 HOXD13P35453 343 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 GSTO1P78417 241 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 COG2Q14746 738 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 LRRC57Q8N9N7 239 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 SEC14L1Q92503 715 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 GLG1Q92896 1179 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 ECT2Q9H8V3 914 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 RIC8AQ9NPQ8 531 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 POLLQ9UGP5 575 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 PCDHA2Q9Y5H9 948 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 LDHCP07864 332 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 IFNAR2P48551 515 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 PPP4CP60510 307 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 ZC2HC1CQ53FD0 456 aaPredicted RBP18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 GLYCTKQ8IVS8 523 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 REEP2Q9BRK0 252 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 NAGPAQ9UK23 515 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 DAGLAQ9Y4D2 1042 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 COL16A1Q07092 1604 aaPredicted RBP18.32■□□□□ 0.52
PPP4R3A-202ENST00000554390 ANKRD33BA6NCL7 494 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 IFI35P80217 286 aaPredicted RBP18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 NFIAQ12857 509 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 DOK7Q18PE1 504 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 THEMIS2Q5TEJ8 643 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 PEX26Q7Z412 305 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 PALB2Q86YC2 1186 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 CCDC65Q8IXS2 484 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 KIF2BQ8N4N8 673 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 CNKSR1Q969H4 720 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 TXLNGYQ9BZA5 131 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 IGSF9BQ9UPX0 1349 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 GPR75-ASB3A0A0A6YYF3 556 aa18.31■□□□□ 0.52
PPP4R3A-202ENST00000554390 CETN3O15182 167 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms