RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 ZNF396Q96N95 335 aaPredicted RBP15.34■□□□□ 0.05
NUMB-209ENST00000554315 NT5C3AQ9H0P0 336 aa15.34■□□□□ 0.05
NUMB-209ENST00000554315 COL4A3BPQ9Y5P4 624 aa15.34■□□□□ 0.05
NUMB-209ENST00000554315 SCN5AQ14524 2016 aa15.33■□□□□ 0.05
NUMB-209ENST00000554315 DENND3A2RUS2 1198 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 STAG3L1P0CL83 205 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 DARSP14868 501 aaKnown RBP15.33■□□□□ 0.04
NUMB-209ENST00000554315 LONP1P36776 959 aaKnown RBP15.33■□□□□ 0.04
NUMB-209ENST00000554315 UBA7P41226 1012 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 RABGGTBP53611 331 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 TFDP1Q14186 410 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 TCTN1Q2MV58 587 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 TMEM143Q96AN5 459 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 CDK5RAP3Q96JB5 506 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 PPP1R16BQ96T49 567 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 ZNF576Q9H609 170 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 ERVK-5Q9HDB9 667 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 C1orf112Q9NSG2 853 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 TET1Q8NFU7 2136 aa15.33■□□□□ 0.04
NUMB-209ENST00000554315 TANC1Q9C0D5 1861 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 ZSCAN22P10073 491 aaPredicted RBP15.32■□□□□ 0.04
NUMB-209ENST00000554315 PBX2P40425 430 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 DEFB103AP81534 67 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 POU5F1BQ06416 359 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 NCBP1Q09161 790 aaKnown RBP15.32■□□□□ 0.04
NUMB-209ENST00000554315 LAMTOR4Q0VGL1 99 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 DRP2Q13474 957 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 POTEGQ6S5H5 508 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 SRGAP1Q7Z6B7 1085 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 TSPYL2Q9H2G4 693 aaPredicted RBP15.32■□□□□ 0.04
NUMB-209ENST00000554315 CHST12Q9NRB3 414 aa15.32■□□□□ 0.04
NUMB-209ENST00000554315 DDX19AQ9NUU7 478 aaKnown RBP15.32■□□□□ 0.04
NUMB-209ENST00000554315 A0A087WZ62 844 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.31■□□□□ 0.04
NUMB-209ENST00000554315 UPP2O95045 317 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 SRGAP2CP0DJJ0 459 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 SFPQP23246 707 aaKnown RBP eCLIP15.31■□□□□ 0.04
NUMB-209ENST00000554315 PCBP1Q15365 356 aaKnown RBP eCLIP15.31■□□□□ 0.04
NUMB-209ENST00000554315 ATL3Q6DD88 541 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 PADI6Q6TGC4 694 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 SLC24A5Q71RS6 500 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 TMEM40Q8WWA1 233 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 NLRP4Q96MN2 994 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 FDXACB1Q9BRP7 624 aaPredicted RBP15.31■□□□□ 0.04
NUMB-209ENST00000554315 RGS18Q9NS28 235 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 CLIC4Q9Y696 253 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 LAMA3Q16787 3333 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 EVPLQ92817 2033 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 A0A087WWV3 80 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 EYA4O95677 639 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 CYP11B2P19099 503 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 RTN4RL1Q86UN2 441 aaPredicted RBP15.31■□□□□ 0.04
NUMB-209ENST00000554315 FAM228AQ86W67 206 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 YME1L1Q96TA2 773 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 ADAM2Q99965 735 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 NKX2-4Q9H2Z4 354 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 MTMR10Q9NXD2 777 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 DACT1Q9NYF0 836 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 LRFN2Q9ULH4 789 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 PCDHB7Q9Y5E2 793 aa15.31■□□□□ 0.04
NUMB-209ENST00000554315 SRPRBQ9Y5M8 271 aaKnown RBP15.31■□□□□ 0.04
NUMB-209ENST00000554315 MORC2Q9Y6X9 1032 aaPredicted RBP15.31■□□□□ 0.04
NUMB-209ENST00000554315 USO1O60763 962 aaKnown RBP15.3■□□□□ 0.04
NUMB-209ENST00000554315 CDC25AP30304 524 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 ARL2P36404 184 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 PHKA2P46019 1235 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 ZRSR1Q15695 479 aaKnown RBP15.3■□□□□ 0.04
NUMB-209ENST00000554315 HYIQ5T013 277 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 PPP2R2DQ66LE6 453 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 FAM117BQ6P1L5 589 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 CABP7Q86V35 215 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 RNF149Q8NC42 400 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 ZNF668Q96K58 619 aaPredicted RBP15.3■□□□□ 0.04
NUMB-209ENST00000554315 BHMT2Q9H2M3 363 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 TMX1Q9H3N1 280 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 YBX2Q9Y2T7 364 aaKnown RBP15.3■□□□□ 0.04
NUMB-209ENST00000554315 WDR81Q562E7 1941 aa15.3■□□□□ 0.04
NUMB-209ENST00000554315 PP2D1A8MPX8 630 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 SARSP49591 514 aaKnown RBP15.29■□□□□ 0.04
NUMB-209ENST00000554315 HTRA4P83105 476 aaPredicted RBP15.29■□□□□ 0.04
NUMB-209ENST00000554315 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
NUMB-209ENST00000554315 PTPAQ15257 358 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 ECM1Q16610 540 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 FAM102BQ5T8I3 360 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 FAM173BQ6P4H8 233 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 NPAS4Q8IUM7 802 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 XPNPEP1Q9NQW7 623 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 BMP2KQ9NSY1 1161 aaPredicted RBP15.29■□□□□ 0.04
NUMB-209ENST00000554315 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
NUMB-209ENST00000554315 CFAP45Q9UL16 551 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 LAMA2P24043 3122 aaKnown RBP15.29■□□□□ 0.04
NUMB-209ENST00000554315 CA3P07451 260 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 SKIP12755 728 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 MYOGP15173 224 aa15.29■□□□□ 0.04
NUMB-209ENST00000554315 FAM189BP81408 668 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 1170.9 ms