RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 PRIMPOLQ96LW4 560 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 YME1L1Q96TA2 773 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 IL1RAPL2Q9NP60 686 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 CD207Q9UJ71 328 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 ISY1Q9ULR0 285 aaKnown RBP8.11□□□□□ -1.11
ATXN3-224ENST00000554040 TRIP12Q14669 1992 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-224ENST00000554040 NAV1Q8NEY1 1877 aa8.11□□□□□ -1.11
ATXN3-224ENST00000554040 NCOR2Q9Y618 2525 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 MINDY4BA8MYZ0 360 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 H0Y858 1186 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 RBAK-RBAKDNI3L0D1 243 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 PRDM1O75626 825 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 EYA4O95677 639 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 RB1P06400 928 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 TXNP10599 105 aaKnown RBP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 MCCP23508 829 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 CBX2Q14781 532 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 TRIM71Q2Q1W2 868 aaKnown RBP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 ZNF618Q5T7W0 954 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 GIMAP6Q6P9H5 292 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 ELMSAN1Q6PJG2 1045 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 ETFBKMTQ8IXQ9 262 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 RGL4Q8IZJ4 473 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 DBF4BQ8NFT6 615 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 FRAT1Q92837 279 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 TOP1MTQ969P6 601 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 ASIC4Q96FT7 647 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 STRBPQ96SI9 672 aaKnown RBP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 FSD1Q9BTV5 496 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 SAP130Q9H0E3 1048 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 PUS7LQ9H0K6 701 aaKnown RBP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 SMG9Q9H0W8 520 aaKnown RBP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 BOLA2Q9H3K6 86 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 ZNF287Q9HBT7 754 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 TLR9Q9NR96 1032 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 PAG1Q9NWQ8 432 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 HDAC6Q9UBN7 1215 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 CCPG1Q9ULG6 757 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 EXOC6BQ9Y2D4 811 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 VPS13AQ96RL7 3174 aa8.1□□□□□ -1.11
ATXN3-224ENST00000554040 COL4A4P53420 1690 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-224ENST00000554040 PRR23AA6NEV1 266 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 GSG1L2A8MUP6 293 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 C5orf67F2Z3F1 127 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 XYLBO75191 536 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 ICAM1P05362 532 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 HOXD8P13378 290 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-224ENST00000554040 CASTP20810 708 aaKnown RBP8.09□□□□□ -1.11
ATXN3-224ENST00000554040 EDNRBP24530 442 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 PDE4BQ07343 736 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 ADAM15Q13444 863 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 ARTNQ5T4W7 220 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 RCSD1Q6JBY9 416 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 KCTD1Q719H9 257 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 CLASRPQ8N2M8 674 aaKnown RBP8.09□□□□□ -1.11
ATXN3-224ENST00000554040 C7orf31Q8N865 590 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 AFG1LQ8WV93 481 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 WNT8BQ93098 351 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 CHMP4CQ96CF2 233 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 LMAN2LQ9H0V9 348 aa8.09□□□□□ -1.11
ATXN3-224ENST00000554040 EMSYQ7Z589 1322 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 PTPRSQ13332 1948 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 PTPDC1A2A3K4 754 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 NFIBO00712 420 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 GRM6O15303 877 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 MMP20O60882 483 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 TBX10O75333 385 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 ARIH2O95376 493 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 MMP3P08254 477 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
ATXN3-224ENST00000554040 RFX1P22670 979 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 NOS3P29474 1203 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
ATXN3-224ENST00000554040 BMPR1AP36894 532 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 NBL1P41271 181 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-224ENST00000554040 SWI5Q1ZZU3 235 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 PLEKHG4Q58EX7 1191 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 HSP90AB4PQ58FF6 505 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 ZSCAN25Q6NSZ9 544 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 CEP85Q6P2H3 762 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 CCDC62Q6P9F0 684 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 WFDC8Q8IUA0 241 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 STK32AQ8WU08 396 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 TP53INP1Q96A56 240 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 MSLNLQ96KJ4 702 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 MPHOSPH6Q99547 160 aaKnown RBP8.08□□□□□ -1.12
ATXN3-224ENST00000554040 HAUS7Q99871 368 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 RANBP17Q9H2T7 1088 aaKnown RBP8.08□□□□□ -1.12
ATXN3-224ENST00000554040 CHD8Q9HCK8 2581 aa8.08□□□□□ -1.12
ATXN3-224ENST00000554040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 RSPH10B2B2RC85 870 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 B4DLN1 442 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 J3QW42 95 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 TNFRSF10BO14763 440 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 LINC01565O15544 149 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms