RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 GBA2Q9HCG7 927 aaPredicted RBP4.16□□□□□ -1.74
SLIRP-202ENST00000553981 FBLN5Q9UBX5 448 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 ZNF214Q9UL59 606 aaPredicted RBP4.16□□□□□ -1.74
SLIRP-202ENST00000553981 MYRFQ9Y2G1 1151 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 ZSWIM8A7E2V4 1837 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 PSME4Q14997 1843 aa4.16□□□□□ -1.74
SLIRP-202ENST00000553981 AKAP11Q9UKA4 1901 aa4.15□□□□□ -1.74
SLIRP-202ENST00000553981 AURKAO14965 403 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 ECE2O60344 883 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 VIL1P09327 827 aaKnown RBP4.15□□□□□ -1.75
SLIRP-202ENST00000553981 KLRK1P26718 216 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 TCIRG1Q13488 830 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 PPP2R5DQ14738 602 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 NFE2L2Q16236 605 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 FBXW10Q5XX13 1052 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 EEF1DP3Q658K8 133 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 DPP8Q6V1X1 898 aaPredicted RBP4.15□□□□□ -1.75
SLIRP-202ENST00000553981 SMARCC2Q8TAQ2 1214 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 TBC1D16Q8TBP0 767 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 CDCA5Q96FF9 252 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 NOX5Q96PH1 765 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 GPR20Q99678 358 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 LNPKQ9C0E8 428 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 GZF1Q9H116 711 aaPredicted RBP4.15□□□□□ -1.75
SLIRP-202ENST00000553981 SPATA6Q9NWH7 488 aaPredicted RBP4.15□□□□□ -1.75
SLIRP-202ENST00000553981 GGA3Q9NZ52 723 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 PPT2Q9UMR5 302 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 DIS3Q9Y2L1 958 aaKnown RBP4.15□□□□□ -1.75
SLIRP-202ENST00000553981 RWDD3Q9Y3V2 267 aa4.15□□□□□ -1.75
SLIRP-202ENST00000553981 SSC5DA1L4H1 1573 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 PAPPA2Q9BXP8 1791 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 TNRC18O15417 2968 aaPredicted RBP4.14□□□□□ -1.75
SLIRP-202ENST00000553981 UBE2Q2LH0YL09 131 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 SNAP23O00161 211 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 PPP1R11O60927 126 aaPredicted RBP4.14□□□□□ -1.75
SLIRP-202ENST00000553981 BBOX1O75936 387 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 MAGEA10P43363 369 aaPredicted RBP4.14□□□□□ -1.75
SLIRP-202ENST00000553981 GJA9P57773 515 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 ADAM17P78536 824 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 NOGQ13253 232 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 TCEAL1Q15170 157 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 SF3B3Q15393 1217 aaKnown RBP4.14□□□□□ -1.75
SLIRP-202ENST00000553981 ZNF394Q53GI3 561 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 KRT26Q7Z3Y9 468 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 CABP7Q86V35 215 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 ZNF761Q86XN6 746 aaPredicted RBP4.14□□□□□ -1.75
SLIRP-202ENST00000553981 LZTR1Q8N653 840 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 NETO2Q8NC67 525 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 ADCY4Q8NFM4 1077 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 CPA5Q8WXQ8 436 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 RTF1Q92541 710 aaKnown RBP4.14□□□□□ -1.75
SLIRP-202ENST00000553981 DPF2Q92785 391 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 RBM15Q96T37 977 aaKnown RBP eCLIP4.14□□□□□ -1.75
SLIRP-202ENST00000553981 VPS33BQ9H267 617 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 PHAXQ9H814 394 aaKnown RBP4.14□□□□□ -1.75
SLIRP-202ENST00000553981 CHPF2Q9P2E5 772 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 PALD1Q9ULE6 856 aa4.14□□□□□ -1.75
SLIRP-202ENST00000553981 STXBP3O00186 592 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 VAMP4O75379 141 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 ITGB3P05106 788 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 ZNF76P36508 570 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 TMPOP42166 694 aaKnown RBP4.13□□□□□ -1.75
SLIRP-202ENST00000553981 SARSP49591 514 aaKnown RBP4.13□□□□□ -1.75
SLIRP-202ENST00000553981 ZNF280AP59817 542 aaPredicted RBP4.13□□□□□ -1.75
SLIRP-202ENST00000553981 CACNB2Q08289 660 aaPredicted RBP4.13□□□□□ -1.75
SLIRP-202ENST00000553981 SLC9A5Q14940 896 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 PARP10Q53GL7 1025 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 KIF6Q6ZMV9 814 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 PPP1R42Q7Z4L9 355 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 CTU1Q7Z7A3 348 aaKnown RBP4.13□□□□□ -1.75
SLIRP-202ENST00000553981 NPM2Q86SE8 214 aaKnown RBP4.13□□□□□ -1.75
SLIRP-202ENST00000553981 CPNE8Q86YQ8 564 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 CCDC146Q8IYE0 955 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 RNF34Q969K3 372 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 PEX11GQ96HA9 241 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 ZBED3Q96IU2 234 aaPredicted RBP4.13□□□□□ -1.75
SLIRP-202ENST00000553981 HAUS7Q99871 368 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 MTA3Q9BTC8 594 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 KLHL25Q9H0H3 589 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 SAGE1Q9NXZ1 904 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 PODXL2Q9NZ53 605 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 NTMQ9P121 344 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 WHRNQ9P202 907 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 GULP1Q9UBP9 304 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 TRMT112Q9UI30 125 aaKnown RBP4.13□□□□□ -1.75
SLIRP-202ENST00000553981 TSPYL4Q9UJ04 414 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 NUDT5Q9UKK9 219 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 PCDHGB7Q9Y5F8 929 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 SPEF2Q9C093 1822 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 SH3TC1Q8TE82 1336 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 CDHR2Q9BYE9 1310 aa4.13□□□□□ -1.75
SLIRP-202ENST00000553981 ZNF609O15014 1411 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 LAMB1P07942 1786 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 C2orf71A6NGG8 1288 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 H7C1D1 291 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 CHL1O00533 1208 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 WNT10BO00744 389 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 CA12O43570 354 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 TM4SF4P48230 202 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 FXR1P51114 621 aaKnown RBP eCLIP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms