RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 KINO60870 393 aaKnown RBP13.57□□□□□ -0.24
SHMT2-209ENST00000553949 HIP1RO75146 1068 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 CAND2O75155 1236 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 VTNP04004 478 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 CKBP12277 381 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 AFMP43652 599 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 RBL2Q08999 1139 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 TMEM62Q0P6H9 643 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 GIT2Q14161 759 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 DYMQ7RTS9 669 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 RHPN2Q8IUC4 686 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 GRAMD1CQ8IYS0 662 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 C7orf61Q8IZ16 206 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 DAW1Q8N136 415 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 CCDC155Q8N6L0 562 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 ASAP3Q8TDY4 903 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 DDX12PQ92771 950 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 DPF3Q92784 378 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 KIFAP3Q92845 792 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 DRC1Q96MC2 740 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
SHMT2-209ENST00000553949 HIPK3Q9H422 1215 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 PRDM5Q9NQX1 630 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-209ENST00000553949 DACT1Q9NYF0 836 aa13.57□□□□□ -0.24
SHMT2-209ENST00000553949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-209ENST00000553949 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 EVI5O60447 810 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 CAPN15O75808 1086 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 CTSHP09668 335 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 GLRA2P23416 452 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 MRPS6P82932 125 aaKnown RBP13.56□□□□□ -0.24
SHMT2-209ENST00000553949 CDC42EP1Q00587 391 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-209ENST00000553949 LAMTOR4Q0VGL1 99 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 MAPK7Q13164 816 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 MXD4Q14582 209 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-209ENST00000553949 ZNF618Q5T7W0 954 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 KANK3Q6NY19 840 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 CNNM4Q6P4Q7 775 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 KSR1Q8IVT5 923 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 TRIM43Q96BQ3 446 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-209ENST00000553949 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 CCDC34Q96HJ3 373 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 PPP1R16BQ96T49 567 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 C7orf25Q9BPX7 421 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 TRIM9Q9C026 710 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 BLZF1Q9H2G9 400 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 ODF2LQ9ULJ1 636 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 COL4A3BPQ9Y5P4 624 aa13.56□□□□□ -0.24
SHMT2-209ENST00000553949 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 M0QZ92 97 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 ASAP2O43150 1006 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-209ENST00000553949 TBCAO75347 108 aaKnown RBP13.55□□□□□ -0.24
SHMT2-209ENST00000553949 GPR32O75388 356 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 FAM13AO94988 1023 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 CHRNA1P02708 482 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 MYL1P05976 194 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 SRGAP2CP0DJJ0 459 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 SELPP16109 830 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 CASP1P29466 404 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 GPC3P51654 580 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 ZNF131P52739 623 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 NLRP11P59045 1033 aaKnown RBP13.55□□□□□ -0.24
SHMT2-209ENST00000553949 MGAT3Q09327 533 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 CUL4BQ13620 913 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 KIZQ2M2Z5 673 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 FAM26DQ5JW98 314 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 LRRC8DQ7L1W4 858 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 BSNDQ8WZ55 320 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 ZNF668Q96K58 619 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-209ENST00000553949 NLRP4Q96MN2 994 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 CELF4Q9BZC1 486 aaKnown RBP13.55□□□□□ -0.24
SHMT2-209ENST00000553949 PPP1R12CQ9BZL4 782 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 ADAMTS10Q9H324 1103 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 PRKAG2Q9UGJ0 569 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 TRPV2Q9Y5S1 764 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 CDY2AQ9Y6F7 541 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 UMODL1Q5DID0 1318 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 ARID2Q68CP9 1835 aa13.55□□□□□ -0.24
SHMT2-209ENST00000553949 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 MBD3O95983 291 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 TIMP1P01033 207 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 IQCF3P0C7M6 154 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 PLS3P13797 630 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 IDEP14735 1019 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 ITGB8P26012 769 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 CYP2C18P33260 490 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 RGS19P49795 217 aa13.54□□□□□ -0.24
SHMT2-209ENST00000553949 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms