RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 TIAF1O95411 115 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 ZBTB48P10074 688 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-202ENST00000553619 VCAM1P19320 739 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 MCM4P33991 863 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 COPB2P35606 906 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 TRAPPC10P48553 1259 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 ADCY7P51828 1080 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 OAZ1P54368 228 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 IRX3P78415 501 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-202ENST00000553619 KIF23Q02241 960 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-202ENST00000553619 FSTL1Q12841 308 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 RESTQ13127 1097 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 SF3A1Q15459 793 aaKnown RBP5.7□□□□□ -1.5
VTI1B-202ENST00000553619 CDC37Q16543 378 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-202ENST00000553619 SHROOM1Q2M3G4 852 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-202ENST00000553619 QRICH1Q2TAL8 776 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 WWC2Q6AWC2 1192 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 OTUD7BQ6GQQ9 843 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 GADL1Q6ZQY3 521 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 FERMT3Q86UX7 667 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 NOSTRINQ8IVI9 506 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 GJD3Q8N144 294 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 COA7Q96BR5 231 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 OPTNQ96CV9 577 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 SPATA32Q96LK8 384 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 AIFM3Q96NN9 605 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 YIPF2Q9BWQ6 316 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 BHLHE41Q9C0J9 482 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-202ENST00000553619 RANBP17Q9H2T7 1088 aaKnown RBP5.7□□□□□ -1.5
VTI1B-202ENST00000553619 PSTPIP2Q9H939 334 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 RIC8AQ9NPQ8 531 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 PPP1R9AQ9ULJ8 1098 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 KCNJ14Q9UNX9 436 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 SLC45A1Q9Y2W3 748 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 RABGAP1Q9Y3P9 1069 aa5.7□□□□□ -1.5
VTI1B-202ENST00000553619 A0A0G2JLL6 359 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 CARNS1A5YM72 827 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 MANSC4A6NHS7 340 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 METTL12A8MUP2 240 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 B4DLN1 442 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 GCOM1H8Y6P7 765 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 TRAF5O00463 557 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 ATP2A1O14983 1001 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 YEATS4O95619 227 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 ICAM1P05362 532 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 POLR2MP0CAP2 368 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 HUNKP57058 714 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 AP3B2Q13367 1082 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 ORC2Q13416 577 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 PKP1Q13835 747 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 STK38Q15208 465 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 NONOQ15233 471 aaKnown RBP eCLIP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 NFKBIBQ15653 356 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 PEAR1Q5VY43 1037 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 PRRT2Q7Z6L0 340 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 CCDC84Q86UT8 332 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 SHISA5Q8N114 240 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 REXO1Q8N1G1 1221 aaKnown RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 FBXL6Q8N531 539 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 C12orf50Q8NA57 414 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 SMG8Q8ND04 991 aaKnown RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 KCNG4Q8TDN1 519 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 HHIPL1Q96JK4 782 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 NUP88Q99567 741 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 SOX17Q9H6I2 414 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-202ENST00000553619 ZFYVE1Q9HBF4 777 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 SLC38A10Q9HBR0 1119 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 RTEL1Q9NZ71 1219 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 FBXO40Q9UH90 709 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 RCOR1Q9UKL0 485 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 CCPG1Q9ULG6 757 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 FZD1Q9UP38 647 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 AGTPBP1Q9UPW5 1226 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 PAPPA2Q9BXP8 1791 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 PHIPQ8WWQ0 1821 aa5.69□□□□□ -1.5
VTI1B-202ENST00000553619 SSC5DA1L4H1 1573 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 LAD1O00515 517 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 VWA5AO00534 786 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 DTNBO60941 627 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 PPP6R2O75170 966 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 PRPF40AO75400 957 aaKnown RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 SLC25A27O95847 323 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 MBD3O95983 291 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 WNT11O96014 354 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 F13BP05160 661 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 ESRRAP11474 423 aaPredicted RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 YY1P25490 414 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 STAT3P40763 770 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 GCLCP48506 637 aaPredicted RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 SERPINB4P48594 390 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 USP11P51784 963 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 ZNF157P51786 506 aaPredicted RBP5.68□□□□□ -1.5
VTI1B-202ENST00000553619 GSTM4Q03013 218 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 SLC39A14Q15043 492 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 USH1GQ495M9 461 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 KIAA1755Q5JYT7 1200 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 CST9Q5W186 159 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 ANO1Q5XXA6 986 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 RGMBQ6NW40 437 aa5.68□□□□□ -1.5
VTI1B-202ENST00000553619 CCDC174Q6PII3 467 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms