RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MYBP10242 640 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 MC4RP32245 332 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 GDNFP39905 211 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 WASP42768 502 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 ERVFC1P60507 584 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 ERVFRD-1P60508 538 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 SLC6A3Q01959 620 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 ADCY2Q08462 1091 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 SNX17Q15036 470 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 PRAMEF18Q5VWM3 479 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 SLC23A3Q6PIS1 610 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 PAQR3Q6TCH7 311 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 GRAMD1CQ8IYS0 662 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 LILRA2Q8N149 483 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 PPP1R35Q8TAP8 253 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 RSAD2Q8WXG1 361 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 EVI5LQ96CN4 794 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 TSPAN17Q96FV3 270 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 AMNQ9BXJ7 453 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 PITHD1Q9GZP4 211 aaPredicted RBP4.9□□□□□ -1.63
TDP1-207ENST00000553617 FAM204AQ9H8W3 233 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 PRDM7Q9NQW5 492 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 DTLQ9NZJ0 730 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 PRSS50Q9UI38 385 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 SCOCQ9UIL1 159 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 IPPQ9Y573 584 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 CDY2AQ9Y6F7 541 aa4.9□□□□□ -1.63
TDP1-207ENST00000553617 ST20-MTHFSA0A0A6YYL1 179 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 ZC3H12DA2A288 527 aaKnown RBP4.89□□□□□ -1.63
TDP1-207ENST00000553617 NFIBO00712 420 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 HTRA2O43464 458 aaPredicted RBP4.89□□□□□ -1.63
TDP1-207ENST00000553617 B3GALT2O43825 422 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 ZBTB7AO95365 584 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 MED26O95402 600 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 LRG1P02750 347 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 PTGS1P23219 599 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 TM4SF4P48230 202 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 RGS3P49796 1198 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 SLC16A1P53985 500 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 ROM1Q03395 351 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 LRP8Q14114 963 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 SPIDRQ14159 915 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 PGS1Q32NB8 556 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 UAP1L1Q3KQV9 507 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 PRAMEF9Q5VWM5 478 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 CD276Q5ZPR3 534 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 SLFN12LQ6IEE8 588 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 INTS5Q6P9B9 1019 aaKnown RBP4.89□□□□□ -1.63
TDP1-207ENST00000553617 VSIG10LQ86VR7 867 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 PROSER1Q86XN7 944 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 MIB1Q86YT6 1006 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 DENND1CQ8IV53 801 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 FAM126BQ8IXS8 530 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 KIAA0319LQ8IZA0 1049 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 FAM156AQ8NDB6 213 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.89□□□□□ -1.63
TDP1-207ENST00000553617 OR14C36Q8NHC7 312 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 ZNF526Q8TF50 670 aaPredicted RBP4.89□□□□□ -1.63
TDP1-207ENST00000553617 CCDC39Q9UFE4 941 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 INTUQ9ULD6 942 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 LIMCH1Q9UPQ0 1083 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 DAAM1Q9Y4D1 1078 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 MYPNQ86TC9 1320 aa4.89□□□□□ -1.63
TDP1-207ENST00000553617 DTNBO60941 627 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 UBXN7O94888 489 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 APOL3O95236 402 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 ARL4AP40617 200 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 ALDH5A1P51649 535 aaPredicted RBP4.88□□□□□ -1.63
TDP1-207ENST00000553617 AGFG1P52594 562 aaKnown RBP4.88□□□□□ -1.63
TDP1-207ENST00000553617 FAM193AP78312 1265 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 MALLQ13021 153 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 SEMA5AQ13591 1074 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 SLC9A5Q14940 896 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 LLGL1Q15334 1064 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 ADRM1Q16186 407 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 FAM83BQ5T0W9 1011 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 ERAP2Q6P179 960 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 NBPF11Q86T75 865 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 DTX1Q86Y01 620 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 PPM1NQ8N819 430 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 MARCH10Q8NA82 808 aaPredicted RBP4.88□□□□□ -1.63
TDP1-207ENST00000553617 LRFN3Q9BTN0 628 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 ACE2Q9BYF1 805 aaPredicted RBP4.88□□□□□ -1.63
TDP1-207ENST00000553617 B3GNT5Q9BYG0 378 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 C19orf44Q9H6X5 657 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 PTPRHQ9HD43 1115 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 UCKL1Q9NWZ5 548 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 GPR160Q9UJ42 338 aa4.88□□□□□ -1.63
TDP1-207ENST00000553617 A0A0A6YYJ9 748 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 KLRG2A4D1S0 409 aaPredicted RBP4.87□□□□□ -1.63
TDP1-207ENST00000553617 CCDC154A6NI56 674 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 ZNF839A8K0R7 811 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 F8W031 263 aaPredicted RBP4.87□□□□□ -1.63
TDP1-207ENST00000553617 HYAL3O43820 417 aaPredicted RBP4.87□□□□□ -1.63
TDP1-207ENST00000553617 OPHN1O60890 802 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 MAFO75444 373 aaPredicted RBP4.87□□□□□ -1.63
TDP1-207ENST00000553617 ALDH2P05091 517 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 SPINK2P20155 84 aa4.87□□□□□ -1.63
TDP1-207ENST00000553617 TRHRP34981 398 aaPredicted RBP4.87□□□□□ -1.63
TDP1-207ENST00000553617 ECE1P42892 770 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms