RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SIK3Q9Y2K2 1263 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 C1orf232A0A0U1RR37 186 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 BTBD11A6QL63 1104 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 IRX4P78413 519 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 KRT81Q14533 505 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ANO1Q5XXA6 986 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 MAML3Q96JK9 1138 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 STK39Q9UEW8 545 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ZNF510Q9Y2H8 683 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 POTEB3A0JP26 581 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 SMCO2A6NFE2 343 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 SLC27A2O14975 620 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 IDH3BO43837 385 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 KRT3P12035 628 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 IFI30P13284 250 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ATP5DP30049 168 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 PLTPP55058 493 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 PLCB3Q01970 1234 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 BBS9Q3SYG4 887 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 POTEBQ6S5H4 581 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 MARK2Q7KZI7 788 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 GALNT7Q86SF2 657 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ANKMY2Q8IV38 441 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 DDI1Q8WTU0 396 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 NAT14Q8WUY8 206 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 PGBD1Q96JS3 809 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 NEK6Q9HC98 313 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 USP15Q9Y4E8 981 aaPredicted RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 IPPQ9Y573 584 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 A0A0G2JND7 137 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 H3BUI4 141 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 DNALI1O14645 258 aaPredicted RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 EPB41P11171 864 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 CALCOCO2Q13137 446 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ARHGAP44Q17R89 818 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 GLE1Q53GS7 698 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 CCDC81Q6ZN84 652 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ZKSCAN3Q9BRR0 538 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 TPK1Q9H3S4 243 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 CABP5Q9NP86 173 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 WARS2Q9UGM6 360 aaKnown RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 ASIC3Q9UHC3 531 aa9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 EVLQ9UI08 416 aaPredicted RBP9.61□□□□□ -0.87
GTF2A1-203ENST00000553612 RASA4BC9J798 803 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 FBP2O00757 339 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 IFIT3O14879 490 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 RASA4O43374 803 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 MAP4P27816 1152 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 CDC25AP30304 524 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 VCPP55072 806 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 DAB2P98082 770 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 ATG14Q6ZNE5 492 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 MS4A14Q96JA4 679 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 TRIM56Q9BRZ2 755 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 NCOA3Q9Y6Q9 1424 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 POC1B-GALNT4F8VUJ3 575 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 KCNQ3O43525 872 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 NR4A1P22736 598 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 CASP1P29466 404 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 CNGA3Q16281 694 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 EGFLAMQ63HQ2 1017 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 HMBOX1Q6NT76 420 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 TRIM65Q6PJ69 517 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 VPS50Q96JG6 964 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 ASNA1O43681 348 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 EPHB1P54762 984 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 RTP1P59025 263 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 PDCD4Q53EL6 469 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 CMTR1Q8N1G2 835 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 DTX3Q8N9I9 347 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 ASZ1Q8WWH4 475 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 TUBGCP5Q96RT8 1024 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 TCEAL9Q9UHQ7 104 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 CRYZL1O95825 349 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 CALB2P22676 271 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 OTUD4Q01804 1114 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 KRT31Q15323 416 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 SATL1Q86VE3 508 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 SESTD1Q86VW0 696 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 REXO1Q8N1G1 1221 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 TMEM87AQ8NBN3 555 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 COX4I2Q96KJ9 171 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 MAP3K20Q9NYL2 800 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 IL1RAPL1Q9NZN1 696 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 FADS3Q9Y5Q0 445 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 A0A0J9YVX5 310 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 TSPAN1O60635 241 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 RXRGP48443 463 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 ASIC1P78348 528 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 CCDC124Q96CT7 223 aaKnown RBP9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 NAPBQ9H115 298 aa9.6□□□□□ -0.87
GTF2A1-203ENST00000553612 SETD1BQ9UPS6 1966 aaKnown RBP9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 ZMYM4Q5VZL5 1548 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 MSH6P52701 1360 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 TBC1D12O60347 775 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 RPS6KB1P23443 525 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 SLC9A3P48764 834 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 FCHO2Q0JRZ9 810 aa9.59□□□□□ -0.87
GTF2A1-203ENST00000553612 TLDC1Q6P9B6 456 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms