RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 KCMF1Q9P0J7 381 aa9.33□□□□□ -0.92
PCNX1-205ENST00000553508 DNAI1Q9UI46 699 aa9.33□□□□□ -0.92
PCNX1-205ENST00000553508 DENND2AQ9ULE3 1009 aa9.33□□□□□ -0.92
PCNX1-205ENST00000553508 OAZ3Q9UMX2 235 aa9.33□□□□□ -0.92
PCNX1-205ENST00000553508 MATN2O00339 956 aa9.32□□□□□ -0.92
PCNX1-205ENST00000553508 CR2P20023 1033 aa9.32□□□□□ -0.92
PCNX1-205ENST00000553508 BCAR1P56945 870 aa9.32□□□□□ -0.92
PCNX1-205ENST00000553508 STRN3Q13033 797 aa9.32□□□□□ -0.92
PCNX1-205ENST00000553508 ZNF585AQ6P3V2 769 aa9.32□□□□□ -0.92
PCNX1-205ENST00000553508 DDX46Q7L014 1031 aaKnown RBP9.32□□□□□ -0.92
PCNX1-205ENST00000553508 RNF180Q86T96 592 aa9.32□□□□□ -0.92
PCNX1-205ENST00000553508 ZNF496Q96IT1 587 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-205ENST00000553508 DEF6Q9H4E7 631 aa9.32□□□□□ -0.92
PCNX1-205ENST00000553508 EMC7Q9NPA0 242 aa9.32□□□□□ -0.92
PCNX1-205ENST00000553508 FOXS1O43638 330 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 MAFO75444 373 aaPredicted RBP9.31□□□□□ -0.92
PCNX1-205ENST00000553508 LSP1P33241 339 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 STAT3P40763 770 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 ID4P47928 161 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 ADAM17P78536 824 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 LRRC32Q14392 662 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 KIAA1841Q6NSI8 718 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 KLHDC10Q6PID8 442 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 STRA8Q7Z7C7 330 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 DYDC2Q96IM9 177 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 MTG2Q9H4K7 406 aa9.31□□□□□ -0.92
PCNX1-205ENST00000553508 ZFR2Q9UPR6 939 aaKnown RBP9.31□□□□□ -0.92
PCNX1-205ENST00000553508 ELL2O00472 640 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-205ENST00000553508 RAB11FIP3O75154 756 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 MASP1P48740 699 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 ATP2C1P98194 919 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-205ENST00000553508 NFYCQ13952 458 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 DDB1Q16531 1140 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 ATP13A4Q4VNC1 1196 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 KANSL1Q7Z3B3 1105 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 CFHR4Q92496 578 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 OR14A2Q96R54 314 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 RBM8AQ9Y5S9 174 aaKnown RBP9.3□□□□□ -0.92
PCNX1-205ENST00000553508 NISCHQ9Y2I1 1504 aa9.3□□□□□ -0.92
PCNX1-205ENST00000553508 ZNF623O75123 536 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 H2AFYO75367 372 aaKnown RBP9.29□□□□□ -0.92
PCNX1-205ENST00000553508 PCDH8O95206 1070 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 ADRB1P08588 477 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 NFKB2Q00653 900 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 TERF2Q15554 542 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 CT47A1Q5JQC4 288 aaPredicted RBP9.29□□□□□ -0.92
PCNX1-205ENST00000553508 BROXQ5VW32 411 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 ESPNLQ6ZVH7 1005 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 ZNF610Q8N9Z0 462 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 DNERQ8NFT8 737 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 Q8TCH9 128 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 FERMT2Q96AC1 680 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 NOL10Q9BSC4 688 aaKnown RBP9.29□□□□□ -0.92
PCNX1-205ENST00000553508 KRTAP4-7Q9BYR0 210 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 CAAP1Q9H8G2 361 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 VWA7Q9Y334 891 aa9.29□□□□□ -0.92
PCNX1-205ENST00000553508 PATE3B3GLJ2 98 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 NEMP1O14524 444 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 HNRNPLP14866 589 aaKnown RBP eCLIP9.28□□□□□ -0.92
PCNX1-205ENST00000553508 BMP8AQ7Z5Y6 402 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 FUKQ8N0W3 1084 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 TTC9BQ8N6N2 239 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 CHAC2Q8WUX2 184 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 SLC5A5Q92911 643 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 GCDHQ92947 438 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-205ENST00000553508 WDR92Q96MX6 357 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 TTC1Q99614 292 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 GPR20Q99678 358 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 PLA2G12BQ9BX93 195 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 CD248Q9HCU0 757 aa9.28□□□□□ -0.92
PCNX1-205ENST00000553508 POLR3BQ9NW08 1133 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-205ENST00000553508 CTDP1Q9Y5B0 961 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-205ENST00000553508 C2orf78A6NCI8 922 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 ZNF20P17024 532 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 SOX5P35711 763 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 SESN2P58004 480 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-205ENST00000553508 KRTAP10-2P60368 255 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 PHC1P78364 1004 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 HGFACQ04756 655 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 DHCR24Q15392 516 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 ZBTB41Q5SVQ8 909 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 PALM2Q8IXS6 379 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 GFM2Q969S9 779 aaKnown RBP9.27□□□□□ -0.93
PCNX1-205ENST00000553508 RPL10LQ96L21 214 aaKnown RBP9.27□□□□□ -0.93
PCNX1-205ENST00000553508 ANO3Q9BYT9 981 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 IFT22Q9H7X7 185 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 SYNPO2Q9UMS6 1093 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 USP18Q9UMW8 372 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 MYPNQ86TC9 1320 aa9.27□□□□□ -0.93
PCNX1-205ENST00000553508 A0A0A6YYJ9 748 aa9.26□□□□□ -0.93
PCNX1-205ENST00000553508 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
PCNX1-205ENST00000553508 OPHN1O60890 802 aa9.26□□□□□ -0.93
PCNX1-205ENST00000553508 BPIP17213 487 aa9.26□□□□□ -0.93
PCNX1-205ENST00000553508 GPR158Q5T848 1215 aa9.26□□□□□ -0.93
PCNX1-205ENST00000553508 HDGFL2Q7Z4V5 671 aaPredicted RBP9.26□□□□□ -0.93
PCNX1-205ENST00000553508 NKD2Q969F2 451 aaPredicted RBP9.26□□□□□ -0.93
PCNX1-205ENST00000553508 TMEM176AQ96HP8 235 aa9.26□□□□□ -0.93
PCNX1-205ENST00000553508 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
PCNX1-205ENST00000553508 PITHD1Q9GZP4 211 aaPredicted RBP9.26□□□□□ -0.93
PCNX1-205ENST00000553508 KLC2Q9H0B6 622 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms