RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 AUTS2Q8WXX7 1259 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 MAP3K14Q99558 947 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 MXRA8Q9BRK3 442 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 LZTS2Q9BRK4 669 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 MRPL9Q9BYD2 267 aaKnown RBP9.66□□□□□ -0.86
NPC2-204ENST00000553490 ZBP1Q9H171 429 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 SEMA4AQ9H3S1 761 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 SFXN1Q9H9B4 322 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 AGO4Q9HCK5 861 aaKnown RBP9.66□□□□□ -0.86
NPC2-204ENST00000553490 TAF6LQ9Y6J9 622 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 R4GN57 208 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 TPRP12270 2363 aaKnown RBP9.66□□□□□ -0.86
NPC2-204ENST00000553490 C2orf16Q68DN1 1984 aa9.66□□□□□ -0.86
NPC2-204ENST00000553490 IGKV6D-21A0A0A0MT36 114 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 hCG_1642624A0A1W2PR95 340 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 ZBTB42B2RXF5 422 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 NT5C1B-RDH14C9J2C7 533 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 E7EWF7 191 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 ZC3H11AO75152 810 aaKnown RBP eCLIP9.65□□□□□ -0.86
NPC2-204ENST00000553490 GPR32O75388 356 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 CCNE2O96020 404 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 ZSCAN20P17040 1043 aaPredicted RBP9.65□□□□□ -0.86
NPC2-204ENST00000553490 SMARCA1P28370 1054 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 GNAQP50148 359 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 CLCN3P51790 818 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 BCAR1P56945 870 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 NUCB1Q02818 461 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 PUM1Q14671 1186 aaKnown RBP eCLIP9.65□□□□□ -0.86
NPC2-204ENST00000553490 CEP55Q53EZ4 464 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 ZNF484Q5JVG2 852 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 OTOP3Q7RTS5 596 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 HEATR3Q7Z4Q2 680 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 CABP7Q86V35 215 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 CHD1LQ86WJ1 897 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 VPS52Q8N1B4 723 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 CMTR1Q8N1G2 835 aaKnown RBP9.65□□□□□ -0.86
NPC2-204ENST00000553490 SRBD1Q8N5C6 995 aaKnown RBP9.65□□□□□ -0.86
NPC2-204ENST00000553490 METTL13Q8N6R0 699 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 FEZF2Q8TBJ5 459 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 PGBD1Q96JS3 809 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 RNF39Q9H2S5 420 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 LY9Q9HBG7 655 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 ZNF302Q9NR11 478 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 AKT3Q9Y243 479 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 ACACBO00763 2458 aa9.65□□□□□ -0.86
NPC2-204ENST00000553490 ATG7O95352 703 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 CXCL14O95715 111 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 RXRAP19793 462 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 ALDH7A1P49419 539 aaKnown RBP9.64□□□□□ -0.87
NPC2-204ENST00000553490 ZC3H14Q6PJT7 736 aaKnown RBP9.64□□□□□ -0.87
NPC2-204ENST00000553490 ABHD15Q6UXT9 468 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 NFXL1Q6ZNB6 911 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 TMEM173Q86WV6 379 aaPredicted RBP9.64□□□□□ -0.87
NPC2-204ENST00000553490 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 MB21D2Q8IYB1 491 aaPredicted RBP9.64□□□□□ -0.87
NPC2-204ENST00000553490 IGDCC4Q8TDY8 1250 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 RIN2Q8WYP3 895 aaPredicted RBP9.64□□□□□ -0.87
NPC2-204ENST00000553490 SCLT1Q96NL6 688 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 MAP7D2Q96T17 732 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 ANO3Q9BYT9 981 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 KCNK12Q9HB15 430 aa9.64□□□□□ -0.87
NPC2-204ENST00000553490 CCDC69A6NI79 296 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 STK25O00506 426 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 NARSO43776 548 aaKnown RBP9.63□□□□□ -0.87
NPC2-204ENST00000553490 KRT37O76014 449 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 CFHP08603 1231 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 CTSAP10619 480 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 POLGP54098 1239 aaPredicted RBP9.63□□□□□ -0.87
NPC2-204ENST00000553490 NLRP11P59045 1033 aaKnown RBP9.63□□□□□ -0.87
NPC2-204ENST00000553490 PTH1RQ03431 593 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 GIT2Q14161 759 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 MIS18BP1Q6P0N0 1132 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 CASC1Q6TDU7 716 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 TRMT1LQ7Z2T5 733 aaKnown RBP9.63□□□□□ -0.87
NPC2-204ENST00000553490 GPR149Q86SP6 731 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 ZNF598Q86UK7 904 aaKnown RBP9.63□□□□□ -0.87
NPC2-204ENST00000553490 RAB11FIP4Q86YS3 637 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 SLC22A17Q8WUG5 538 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 BBXQ8WY36 941 aaPredicted RBP9.63□□□□□ -0.87
NPC2-204ENST00000553490 TBC1D17Q9HA65 648 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 TCEAL9Q9UHQ7 104 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 IRAK3Q9Y616 596 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 FANCMQ8IYD8 2048 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 SPTBN2O15020 2390 aa9.63□□□□□ -0.87
NPC2-204ENST00000553490 MYH9P35579 1960 aaKnown RBP9.63□□□□□ -0.87
NPC2-204ENST00000553490 ZFHX4Q86UP3 3567 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 GPR179Q6PRD1 2367 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 A0A0U1RQF3 1178 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 KRBA1A5PL33 1030 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 PRC1O43663 620 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 ATP4AP20648 1035 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 EIF4BP23588 611 aaKnown RBP9.62□□□□□ -0.87
NPC2-204ENST00000553490 SREBF1P36956 1147 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 NAPAP54920 295 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 PTPN14Q15678 1187 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 SPECC1Q5M775 1068 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 WWC2Q6AWC2 1192 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 SWSAP1Q6NVH7 229 aa9.62□□□□□ -0.87
NPC2-204ENST00000553490 PPP1R18Q6NYC8 613 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms