RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 DDX11L8A8MPP1 907 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 PI4K2BG5E9Z4 385 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 M0R2N6 131 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 EDIL3O43854 480 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 PFKFB2O60825 505 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
LINC00643-202ENST00000553426 LAG3P18627 525 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 LTBRP36941 435 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 GPC3P51654 580 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 SCRN1Q12765 414 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 CAMK1Q14012 370 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 DSC3Q14574 896 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 UGCGQ16739 394 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 NEK8Q86SG6 692 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 LINC01465Q8N7H1 131 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 FAM20AQ96MK3 541 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 MBOAT7Q96N66 472 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 AIFM3Q96NN9 605 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 GCOM2Q9BZD3 368 aaPredicted RBP14.33□□□□□ -0.12
LINC00643-202ENST00000553426 INO80BQ9C086 356 aaPredicted RBP14.33□□□□□ -0.12
LINC00643-202ENST00000553426 BRMS1Q9HCU9 246 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 TYW1Q9NV66 732 aaKnown RBP14.33□□□□□ -0.12
LINC00643-202ENST00000553426 PPP4R2Q9NY27 417 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 PUF60Q9UHX1 559 aaKnown RBP14.33□□□□□ -0.12
LINC00643-202ENST00000553426 KCNJ14Q9UNX9 436 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 ARIH1Q9Y4X5 557 aaPredicted RBP14.33□□□□□ -0.12
LINC00643-202ENST00000553426 STK36Q9NRP7 1315 aa14.33□□□□□ -0.12
LINC00643-202ENST00000553426 FAM86C2PA6NEL3 165 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 DARSP14868 501 aaKnown RBP14.32□□□□□ -0.12
LINC00643-202ENST00000553426 SFPQP23246 707 aaKnown RBP eCLIP14.32□□□□□ -0.12
LINC00643-202ENST00000553426 PSMC5P62195 406 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 ADAM15Q13444 863 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 SMAD4Q13485 552 aaKnown RBP14.32□□□□□ -0.12
LINC00643-202ENST00000553426 CLUL1Q15846 466 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 ERICH6BQ5W0A0 696 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 PDE12Q6L8Q7 609 aaKnown RBP14.32□□□□□ -0.12
LINC00643-202ENST00000553426 EXOC8Q8IYI6 725 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 LRRC43Q8N309 656 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 EFHBQ8N7U6 833 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 RNF169Q8NCN4 708 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 ETNPPLQ8TBG4 499 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 TLE6Q9H808 572 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 CD320Q9NPF0 282 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 TLR9Q9NR96 1032 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 CD207Q9UJ71 328 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 HCN4Q9Y3Q4 1203 aa14.32□□□□□ -0.12
LINC00643-202ENST00000553426 CCNT1O60563 726 aaKnown RBP14.31□□□□□ -0.12
LINC00643-202ENST00000553426 GPR37L1O60883 481 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 FGF18O76093 207 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 EOMESO95936 686 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 FGFR1P11362 822 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 DNAJB1P25685 340 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 PPM1AP35813 382 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 NRIP1P48552 1158 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 KRT17Q04695 432 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 TARBP2Q15633 366 aaKnown RBP14.31□□□□□ -0.12
LINC00643-202ENST00000553426 NPY5RQ15761 445 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 SMAD2Q15796 467 aaKnown RBP14.31□□□□□ -0.12
LINC00643-202ENST00000553426 PPP4R3AQ6IN85 833 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 RBM23Q86U06 439 aaKnown RBP14.31□□□□□ -0.12
LINC00643-202ENST00000553426 ADHFE1Q8IWW8 467 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 COLGALT1Q8NBJ5 622 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 ZNF668Q96K58 619 aaPredicted RBP14.31□□□□□ -0.12
LINC00643-202ENST00000553426 CHST12Q9NRB3 414 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 ORC3Q9UBD5 711 aaPredicted RBP14.31□□□□□ -0.12
LINC00643-202ENST00000553426 TPCN1Q9ULQ1 816 aa14.31□□□□□ -0.12
LINC00643-202ENST00000553426 A0A0U1RQF3 1178 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 TBX3O15119 743 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 MBTPS2O43462 519 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 TBX10O75333 385 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 MAFO75444 373 aaPredicted RBP14.3□□□□□ -0.12
LINC00643-202ENST00000553426 BAG4O95429 457 aaKnown RBP14.3□□□□□ -0.12
LINC00643-202ENST00000553426 SRGAP2BP0DMP2 458 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 SKIP12755 728 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 GTF2F1P35269 517 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINC00643-202ENST00000553426 IRS1P35568 1242 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 QARSP47897 775 aaKnown RBP14.3□□□□□ -0.12
LINC00643-202ENST00000553426 ZP2Q05996 745 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 DLX2Q07687 328 aaPredicted RBP14.3□□□□□ -0.12
LINC00643-202ENST00000553426 PPP2R5CQ13362 524 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 B3GNT9Q6UX72 402 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 PIK3AP1Q6ZUJ8 805 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 ZNF410Q86VK4 478 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 ECHDC2Q86YB7 292 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 RHPN2Q8IUC4 686 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 SLC7A3Q8WY07 619 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 RSPH1Q8WYR4 309 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 ZNF558Q96NG5 402 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 CDCA3Q99618 268 aaPredicted RBP14.3□□□□□ -0.12
LINC00643-202ENST00000553426 MRPL9Q9BYD2 267 aaKnown RBP14.3□□□□□ -0.12
LINC00643-202ENST00000553426 SUCLA2Q9P2R7 463 aaPredicted RBP14.3□□□□□ -0.12
LINC00643-202ENST00000553426 LZTS1Q9Y250 596 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 PPME1Q9Y570 386 aa14.3□□□□□ -0.12
LINC00643-202ENST00000553426 IGKV6-21A0A0C4DH24 114 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 CARNS1A5YM72 827 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 LINC01565O15544 149 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 DCXO43602 365 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 SLC37A4O43826 429 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 P4HBP07237 508 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms