RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SPIRE1Q08AE8 756 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 DSC3Q14574 896 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 NAALADL2Q58DX5 795 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 NCAPH2Q6IBW4 605 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 OTUD6AQ7L8S5 288 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 C4orf19Q8IY42 314 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 NLRP7Q8WX94 980 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 P2RX5Q93086 422 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 SH2D3AQ9BRG2 576 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 GCOM2Q9BZD3 368 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-207ENST00000553290 ELAC1Q9H777 363 aaKnown RBP14.52□□□□□ -0.09
ACTN1-207ENST00000553290 CYP26B1Q9NR63 512 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 TMEM161AQ9NX61 479 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 PCDHA12Q9UN75 941 aa14.52□□□□□ -0.09
ACTN1-207ENST00000553290 NEMFO60524 1076 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 IBSPP21815 317 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-207ENST00000553290 CALCRLQ16602 461 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 PAN2Q504Q3 1202 aaKnown RBP14.51□□□□□ -0.09
ACTN1-207ENST00000553290 ZNF410Q86VK4 478 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 ADAMTS19Q8TE59 1207 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 SLC7A3Q8WY07 619 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 C8orf76Q96K31 380 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 CEP170P1Q96L14 293 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 LXNQ9BS40 222 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 INO80BQ9C086 356 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-207ENST00000553290 ZSWIM4Q9H7M6 989 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 ATP6V0A4Q9HBG4 840 aa14.51□□□□□ -0.09
ACTN1-207ENST00000553290 SUCLA2Q9P2R7 463 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-207ENST00000553290 MRPL42Q9Y6G3 142 aaKnown RBP14.51□□□□□ -0.09
ACTN1-207ENST00000553290 FNDC1Q4ZHG4 1894 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-207ENST00000553290 TTC28Q96AY4 2481 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 HOXA2O43364 376 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 BMP1P13497 986 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 YWHABP31946 246 aaKnown RBP14.5□□□□□ -0.09
ACTN1-207ENST00000553290 RFC5P40937 340 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 NPEPPSP55786 919 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 DRP2Q13474 957 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 RABEP1Q15276 862 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 PLA2G4FQ68DD2 849 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 FAM184AQ8NB25 1140 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 NEK9Q8TD19 979 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 DYDC2Q96IM9 177 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 ZNF668Q96K58 619 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-207ENST00000553290 NSUN3Q9H649 340 aaKnown RBP14.5□□□□□ -0.09
ACTN1-207ENST00000553290 RGL1Q9NZL6 768 aa14.5□□□□□ -0.09
ACTN1-207ENST00000553290 WRAP73Q9P2S5 460 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-207ENST00000553290 SPTBN5Q9NRC6 3674 aaKnown RBP14.5□□□□□ -0.09
ACTN1-207ENST00000553290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 TBKBP1A7MCY6 615 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 GRM6O15303 877 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 GAS2O43903 313 aaKnown RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 SFPQP23246 707 aaKnown RBP eCLIP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 TXKP42681 527 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 GATMP50440 423 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 KCNQ1P51787 676 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 POLGP54098 1239 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 GUCY1B3Q02153 619 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 FAM102BQ5T8I3 360 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 RHPN2Q8IUC4 686 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 FBXO18Q8NFZ0 1043 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 MTMR9Q96QG7 549 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 UHRF1Q96T88 793 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 EIF2AK1Q9BQI3 630 aaKnown RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 FOXP1Q9H334 677 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 DHX33Q9H6R0 707 aaKnown RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 UBE2ZQ9H832 354 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 TTC12Q9H892 705 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 UPF2Q9HAU5 1272 aaKnown RBP14.49□□□□□ -0.09
ACTN1-207ENST00000553290 CHST12Q9NRB3 414 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 AAASQ9NRG9 546 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 DACT1Q9NYF0 836 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 PLAGL2Q9UPG8 496 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 KIAA1671Q9BY89 1806 aa14.49□□□□□ -0.09
ACTN1-207ENST00000553290 BRWD1Q9NSI6 2320 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 TCF20Q9UGU0 1960 aaKnown RBP14.48□□□□□ -0.09
ACTN1-207ENST00000553290 A0A087WZ62 844 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 A0A0U1RQF3 1178 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 TNFRSF10AO00220 468 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 NCK2O43639 380 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 ST18O60284 1047 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 SLITRK3O94933 977 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 LYPLA2O95372 231 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 EOMESO95936 686 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 FGFR4P22455 802 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 CYP4A11Q02928 519 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 ORC2Q13416 577 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-207ENST00000553290 CTTNQ14247 550 aaKnown RBP14.48□□□□□ -0.09
ACTN1-207ENST00000553290 XKR9Q5GH70 373 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 TCEAL5Q5H9L2 206 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 SPOUT1Q5T280 376 aaKnown RBP14.48□□□□□ -0.09
ACTN1-207ENST00000553290 ECHDC2Q86YB7 292 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 TPH2Q8IWU9 490 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 ZNF579Q8NAF0 562 aaKnown RBP14.48□□□□□ -0.09
ACTN1-207ENST00000553290 KLHL23Q8NBE8 558 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 TCP11Q8WWU5 503 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 HSD17B14Q9BPX1 270 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 FDXACB1Q9BRP7 624 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-207ENST00000553290 TMEM117Q9H0C3 514 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 ALG13Q9NP73 1137 aaKnown RBP14.48□□□□□ -0.09
ACTN1-207ENST00000553290 PCDHB12Q9Y5F1 795 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms