RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 MEIS1O00470 390 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 CHMP2AO43633 222 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 SLC37A4O43826 429 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 GLP2RO95838 553 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 ITGB5P18084 799 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 COASYQ13057 564 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 CBX2Q14781 532 aaPredicted RBP12.76□□□□□ -0.37
TMEM116-218ENST00000552839 TAF2Q6P1X5 1199 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 RBM23Q86U06 439 aaKnown RBP12.76□□□□□ -0.37
TMEM116-218ENST00000552839 RTN4RL1Q86UN2 441 aaPredicted RBP12.76□□□□□ -0.37
TMEM116-218ENST00000552839 SUGP1Q8IWZ8 645 aaKnown RBP12.76□□□□□ -0.37
TMEM116-218ENST00000552839 CRIPAKQ8N1N5 446 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 FBXL6Q8N531 539 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 POF1BQ8WVV4 589 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 DNAJB3Q8WWF6 145 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 PPP2R3CQ969Q6 453 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 AGO3Q9H9G7 860 aaKnown RBP12.76□□□□□ -0.37
TMEM116-218ENST00000552839 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
TMEM116-218ENST00000552839 TBC1D22BQ9NU19 505 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 FAM86C1Q9NVL1 165 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 USP15Q9Y4E8 981 aaPredicted RBP12.76□□□□□ -0.37
TMEM116-218ENST00000552839 CDY2AQ9Y6F7 541 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 TRIOO75962 3097 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 MYH15Q9Y2K3 1946 aa12.76□□□□□ -0.37
TMEM116-218ENST00000552839 CYP3A7-CYP3A51PA0A087WV96 503 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 LAD1O00515 517 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 MSH4O15457 936 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 ARP10275 920 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 CYP3A7P24462 503 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 TXKP42681 527 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 NRIP1P48552 1158 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 PLXNA3P51805 1871 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 FNDC1Q4ZHG4 1894 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-218ENST00000552839 NAALADL2Q58DX5 795 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 FAM173BQ6P4H8 233 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 TSHZ1Q6ZSZ6 1077 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 CMTR2Q8IYT2 770 aaKnown RBP12.75□□□□□ -0.37
TMEM116-218ENST00000552839 KLHL23Q8NBE8 558 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 RASSF8Q8NHQ8 419 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 CYP2W1Q8TAV3 490 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 SENP7Q9BQF6 1050 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
TMEM116-218ENST00000552839 BARX2Q9UMQ3 279 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-218ENST00000552839 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 PCDHGC5Q9Y5F6 944 aa12.75□□□□□ -0.37
TMEM116-218ENST00000552839 IGLV3-22A0A075B6J6 115 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 MBLAC1A4D2B0 266 aaPredicted RBP12.74□□□□□ -0.37
TMEM116-218ENST00000552839 BACH1O14867 736 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 TBX3O15119 743 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 GFRA3O60609 400 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 MARK3P27448 753 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 CD52P31358 61 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 TCF7P36402 384 aaPredicted RBP12.74□□□□□ -0.37
TMEM116-218ENST00000552839 VCPP55072 806 aaKnown RBP12.74□□□□□ -0.37
TMEM116-218ENST00000552839 KRT76Q01546 638 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 SIGLEC14Q08ET2 396 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 PPFIA1Q13136 1202 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 PTGDRQ13258 359 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 GRIK4Q16099 956 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 PAN2Q504Q3 1202 aaKnown RBP12.74□□□□□ -0.37
TMEM116-218ENST00000552839 MARCH8Q5T0T0 291 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 ATL3Q6DD88 541 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 NCAPH2Q6IBW4 605 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 DTHD1Q6ZMT9 781 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 RSPH3Q86UC2 560 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 CRYGNQ8WXF5 182 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 RPGRIP1Q96KN7 1286 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 PHF7Q9BWX1 381 aaPredicted RBP12.74□□□□□ -0.37
TMEM116-218ENST00000552839 SLC9A2Q9UBY0 812 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 TUBE1Q9UJT0 475 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 MYO10Q9HD67 2058 aa12.74□□□□□ -0.37
TMEM116-218ENST00000552839 ZDBF2Q9HCK1 2354 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 NFASCO94856 1347 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 ATP9AO75110 1047 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 AVPR2P30518 371 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 TXLNAP40222 546 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 GATMP50440 423 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 JAK3P52333 1124 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 MRPS6P82932 125 aaKnown RBP12.73□□□□□ -0.37
TMEM116-218ENST00000552839 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
TMEM116-218ENST00000552839 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
TMEM116-218ENST00000552839 MIS18BP1Q6P0N0 1132 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 NPAS4Q8IUM7 802 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 ZBTB10Q96DT7 871 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 SPATA32Q96LK8 384 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
TMEM116-218ENST00000552839 MBOAT7Q96N66 472 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 USP28Q96RU2 1077 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 RIT2Q99578 217 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 AZI2Q9H6S1 392 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.73□□□□□ -0.37
TMEM116-218ENST00000552839 CLIC4Q9Y696 253 aa12.73□□□□□ -0.37
TMEM116-218ENST00000552839 USP34Q70CQ2 3546 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 GSTTP1A0A1W2PQM5 241 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 VWA3AA6NCI4 1184 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 GOLGA6L4A6NEF3 574 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms