RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
TMEM116-215ENST00000552374 ATXN2LQ8WWM7 1075 aaKnown RBP12.22□□□□□ -0.45
TMEM116-215ENST00000552374 EIF2AK1Q9BQI3 630 aaKnown RBP12.22□□□□□ -0.45
TMEM116-215ENST00000552374 JPH2Q9BR39 696 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-215ENST00000552374 TMEM60Q9H2L4 133 aa12.22□□□□□ -0.45
TMEM116-215ENST00000552374 FOXP1Q9H334 677 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-215ENST00000552374 C1orf112Q9NSG2 853 aa12.22□□□□□ -0.45
TMEM116-215ENST00000552374 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-215ENST00000552374 PRRC2BQ5JSZ5 2229 aaKnown RBP12.22□□□□□ -0.45
TMEM116-215ENST00000552374 ADGRA3Q8IWK6 1321 aa12.22□□□□□ -0.45
TMEM116-215ENST00000552374 A0A087WWV3 80 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 A0A087WZ62 844 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 IGKV6-21A0A0C4DH24 114 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 DARSP14868 501 aaKnown RBP12.21□□□□□ -0.45
TMEM116-215ENST00000552374 POLGP54098 1239 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-215ENST00000552374 TFF2Q03403 129 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 PTPROQ16827 1216 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 SPOUT1Q5T280 376 aaKnown RBP12.21□□□□□ -0.45
TMEM116-215ENST00000552374 FAM102BQ5T8I3 360 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 SLC7A3Q8WY07 619 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 TMEM143Q96AN5 459 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 ASB2Q96Q27 587 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 MTMR9Q96QG7 549 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-215ENST00000552374 GCOM2Q9BZD3 368 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-215ENST00000552374 ATP6V0A4Q9HBG4 840 aa12.21□□□□□ -0.45
TMEM116-215ENST00000552374 GBF1Q92538 1859 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 TBKBP1A7MCY6 615 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 C9IYK1 514 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 CSPG5O95196 566 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 RB1P06400 928 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 SRGAP2CP0DJJ0 459 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 TECP42680 631 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 FAM189BP81408 668 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 TJAP1Q5JTD0 557 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 NOSTRINQ8IVI9 506 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 EXOC8Q8IYI6 725 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 RNF169Q8NCN4 708 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 PRPF31Q8WWY3 499 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 MRPL38Q96DV4 380 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 NLRP4Q96MN2 994 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 HSD17B14Q9BPX1 270 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 RC3H2Q9HBD1 1191 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 MRPL42Q9Y6G3 142 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 RFC5P40937 340 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 DSC3Q14574 896 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 FAM43BQ6ZT52 329 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 CMTR2Q8IYT2 770 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 PIGOQ8TEQ8 1089 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 CLP1Q92989 425 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 HLA-CQ95604 372 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 C11orf84Q9BUA3 381 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 INO80BQ9C086 356 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 DHX33Q9H6R0 707 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
TMEM116-215ENST00000552374 KIF3AQ9Y496 699 aa12.2□□□□□ -0.46
TMEM116-215ENST00000552374 POTEMA6NI47 508 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 C5orf67F2Z3F1 127 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 GRM6O15303 877 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 LINC00271P0C7V0 271 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 FGFR1P11362 822 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 NBR1Q14596 966 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 TTC38Q5R3I4 469 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 CATSPER4Q7RTX7 472 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 ZNF410Q86VK4 478 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
TMEM116-215ENST00000552374 CCDC43Q96MW1 224 aaKnown RBP12.19□□□□□ -0.46
TMEM116-215ENST00000552374 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 TYW1Q9NV66 732 aaKnown RBP12.19□□□□□ -0.46
TMEM116-215ENST00000552374 TMEM161AQ9NX61 479 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
TMEM116-215ENST00000552374 COG5Q9UP83 839 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 PPME1Q9Y570 386 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 COL4A3BPQ9Y5P4 624 aa12.19□□□□□ -0.46
TMEM116-215ENST00000552374 MICAL3Q7RTP6 2002 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 OR52Z1P0C646 297 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
TMEM116-215ENST00000552374 MCM2P49736 904 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 LAMTOR4Q0VGL1 99 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 EMC2Q15006 297 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 AAK1Q2M2I8 961 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 ABI1Q8IZP0 508 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 KLHL23Q8NBE8 558 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 NEK9Q8TD19 979 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 TCP11Q8WWU5 503 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 ELAC1Q9H777 363 aaKnown RBP12.18□□□□□ -0.46
TMEM116-215ENST00000552374 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 DACT1Q9NYF0 836 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
TMEM116-215ENST00000552374 TTC3P53804 2025 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms