RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 FAM186BQ8IYM0 893 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 LENG9Q96B70 501 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 LZTFL1Q9NQ48 299 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 CNMDO75829 334 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 RGS20O76081 388 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 ZNF75DP51815 510 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 CCL23P55773 120 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 MAPK6Q16659 721 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 ZNF568Q3ZCX4 644 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 SPATA1Q5VX52 437 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 OLFML2BQ68BL8 750 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 FAM114A1Q8IWE2 563 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 NEK11Q8NG66 645 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 LSM14BQ9BX40 385 aaKnown RBP8.95□□□□□ -0.98
CHPT1-208ENST00000552215 FLRT1Q9NZU1 646 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 TUBE1Q9UJT0 475 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 CLDN3O15551 220 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 KRT9P35527 623 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 ARPP19P56211 112 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 POLR2FP61218 127 aaKnown RBP8.95□□□□□ -0.98
CHPT1-208ENST00000552215 GIT2Q14161 759 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 CELF3Q5SZQ8 465 aaKnown RBP8.95□□□□□ -0.98
CHPT1-208ENST00000552215 LRRC15Q8TF66 581 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 TIGD1Q96MW7 591 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 INPP4AQ96PE3 977 aaPredicted RBP8.95□□□□□ -0.98
CHPT1-208ENST00000552215 CEP89Q96ST8 783 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 CBWD1Q9BRT8 395 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 TMEM106CQ9BVX2 250 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 HMX1Q9NP08 348 aaPredicted RBP8.95□□□□□ -0.98
CHPT1-208ENST00000552215 HPSEQ9Y251 543 aa8.95□□□□□ -0.98
CHPT1-208ENST00000552215 PRRC2BQ5JSZ5 2229 aaKnown RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 TMEM110-MUSTN1A8MSY1 372 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 BMP6P22004 513 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 GRK4P32298 578 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 KLK7P49862 253 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 PTCH2Q9Y6C5 1203 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 SLC15A5A6NIM6 579 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 TBX3O15119 743 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 FARP2O94887 1054 aaPredicted RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 NR3C1P04150 777 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 PNMA6AP0CW24 399 aaPredicted RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 GHRP10912 638 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 NOP2P46087 812 aaKnown RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 MTFR1Q15390 333 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 ZNF746Q6NUN9 644 aaPredicted RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 GIMAP8Q8ND71 665 aaPredicted RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 ZNF397Q8NF99 534 aaPredicted RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 ACCSQ96QU6 501 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 ADPGKQ9BRR6 497 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 TUFT1Q9NNX1 390 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 EXOC7Q9UPT5 735 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 SPATA31C2B4DYI2 1134 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 KBTBD13C9JR72 458 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 M0R2N6 131 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 INHAP05111 366 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 KCNA2P16389 499 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 NPTX2P47972 431 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 KRT31Q15323 416 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 GLYCTKQ8IVS8 523 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 PI4K2AQ9BTU6 479 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 STARD7Q9NQZ5 370 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 HDAC6Q9UBN7 1215 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 VAV3Q9UKW4 847 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 ZEB2O60315 1214 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 SNAI1O95863 264 aaPredicted RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 AKR1A1P14550 325 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 CCNE1P24864 410 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 FKBP3Q00688 224 aaKnown RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 RNF180Q86T96 592 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 SYT2Q8N9I0 419 aaPredicted RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 MCPH1Q8NEM0 835 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 TRIB2Q92519 343 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 PSMB7Q99436 277 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 IMPG2Q9BZV3 1241 aa8.94□□□□□ -0.98
CHPT1-208ENST00000552215 LUC7L2Q9Y383 392 aaKnown RBP8.94□□□□□ -0.98
CHPT1-208ENST00000552215 DGAT1O75907 488 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 ACTN1P12814 892 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 COPB1P53618 953 aaKnown RBP8.93□□□□□ -0.98
CHPT1-208ENST00000552215 PRPF4BQ13523 1007 aaKnown RBP8.93□□□□□ -0.98
CHPT1-208ENST00000552215 CLEC17AQ6ZS10 378 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 REPS2Q8NFH8 660 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 APBA2Q99767 749 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 NAV1Q8NEY1 1877 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 SSC5DA1L4H1 1573 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 MACROD2A1Z1Q3 448 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 CCDC85CA6NKD9 419 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 TMEM191BP0C7N4 346 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 RNASELQ05823 741 aaKnown RBP8.93□□□□□ -0.98
CHPT1-208ENST00000552215 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 GRIK4Q16099 956 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 KNOP1Q1ED39 458 aaKnown RBP8.93□□□□□ -0.98
CHPT1-208ENST00000552215 SMAP1Q8IYB5 467 aaPredicted RBP8.93□□□□□ -0.98
CHPT1-208ENST00000552215 CCDC150Q8NCX0 1101 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 GTF3C2Q8WUA4 911 aaPredicted RBP8.93□□□□□ -0.98
CHPT1-208ENST00000552215 CUEDC2Q9H467 287 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 TOPORSQ9NS56 1045 aaPredicted RBP8.93□□□□□ -0.98
CHPT1-208ENST00000552215 GSTTP1A0A1W2PQM5 241 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 PLA2G6O60733 806 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 CASP14P31944 242 aa8.93□□□□□ -0.98
CHPT1-208ENST00000552215 CIITAP33076 1130 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms