RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 KRT85P78386 507 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 SHC4Q6S5L8 630 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 RHPN2Q8IUC4 686 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 EXOC8Q8IYI6 725 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 KCNG4Q8TDN1 519 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 TMEM40Q8WWA1 233 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 OSMRQ99650 979 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 MTRQ99707 1265 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 JPH2Q9BR39 696 aaPredicted RBP16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 ATP6V0A4Q9HBG4 840 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 GPRC5CQ9NQ84 441 aa16.87■□□□□ 0.29
SMARCD1-211ENST00000551497 ARID2Q68CP9 1835 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 TANC1Q9C0D5 1861 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 A0A087X0B3 334 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 SLC26A4O43511 780 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 CSDE1O75534 798 aaKnown RBP16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 SSBP05455 408 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 SRGAP2CP0DJJ0 459 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 ARL2P36404 184 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 GPC3P51654 580 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 CRYBB1P53674 252 aaPredicted RBP16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 PLEKHG4Q58EX7 1191 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 RASSF8Q8NHQ8 419 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 SPATA32Q96LK8 384 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 NT5C3AQ9H0P0 336 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 BLOC1S4Q9NUP1 217 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 CXXC1Q9P0U4 656 aaPredicted RBP16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 NOC2LQ9Y3T9 749 aaKnown RBP16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 KDM3AQ9Y4C1 1321 aa16.86■□□□□ 0.29
SMARCD1-211ENST00000551497 SIP14410 1827 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 A0A087WZ62 844 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 PFKMP08237 780 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 PLA2G4BP0C869 781 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 CD52P31358 61 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 LAMTOR4Q0VGL1 99 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 DHX8Q14562 1220 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 FAM102BQ5T8I3 360 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 RINT1Q6NUQ1 792 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 PSRC1Q6PGN9 363 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 C1orf186Q6ZWK4 172 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 TDHQ8IZJ6 230 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 SYT2Q8N9I0 419 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 ASAP3Q8TDY4 903 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 NLRP7Q8WX94 980 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 PSPC1Q8WXF1 523 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 HERVK_113Q902F9 699 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 IPO9Q96P70 1041 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 FDXACB1Q9BRP7 624 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 RUSC1Q9BVN2 902 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 COL4A3BPQ9Y5P4 624 aa16.85■□□□□ 0.29
SMARCD1-211ENST00000551497 SLC12A3P55017 1021 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 MCM6Q14566 821 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 RRAGBQ5VZM2 374 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 CNKSR3Q6P9H4 555 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 TSHZ1Q6ZSZ6 1077 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 PDILTQ8N807 584 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 SEPT8Q92599 483 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 SCLT1Q96NL6 688 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 IFIH1Q9BYX4 1025 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 POLR3FQ9H1D9 316 aaPredicted RBP16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 CHMP5Q9NZZ3 219 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 CCDC39Q9UFE4 941 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 PADI3Q9ULW8 664 aa16.84■□□□□ 0.29
SMARCD1-211ENST00000551497 NPHP3-ACAD11A0A0J9YXS1 232 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 GAS2O43903 313 aaKnown RBP16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 ACTN1P12814 892 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 DARSP14868 501 aaKnown RBP16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 FGFR4P22455 802 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 GLRA2P23416 452 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 EIF4BP23588 611 aaKnown RBP16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 RAD51AP2Q09MP3 1159 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 NFX1Q12986 1120 aaKnown RBP16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 IKBKEQ14164 716 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 NAALADL2Q58DX5 795 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 ARSHQ5FYA8 562 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 RASIP1Q5U651 963 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 RTN4RL1Q86UN2 441 aaPredicted RBP16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 KCTD17Q8N5Z5 321 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 MCPH1Q8NEM0 835 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 BSNDQ8WZ55 320 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 RAD54LQ92698 747 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 SCAND2PQ9GZW5 306 aaPredicted RBP16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 IFT122Q9HBG6 1241 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 ERVK-5Q9HDB9 667 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 ST3GAL5Q9UNP4 418 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 SQORQ9Y6N5 450 aa16.83■□□□□ 0.28
SMARCD1-211ENST00000551497 ABHD14A-ACY1A0A1B0GW23 586 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 SFI1A8K8P3 1242 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 ZBBXA8MT70 800 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 ASAP2O43150 1006 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 RPS6KA5O75582 802 aa16.82■□□□□ 0.28
SMARCD1-211ENST00000551497 TXLNAP40222 546 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms