RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 C7orf31Q8N865 590 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 WDR48Q8TAF3 677 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 ERCC4Q92889 916 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-215ENST00000551391 ZSWIM3Q96MP5 696 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 TUBGCP5Q96RT8 1024 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 C1QTNF3Q9BXJ4 246 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 KCNG1Q9UIX4 513 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 MSRAQ9UJ68 235 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 FBXO10Q9UK96 956 aa4.8□□□□□ -1.64
SCAF11-215ENST00000551391 NOC2LQ9Y3T9 749 aaKnown RBP4.8□□□□□ -1.64
SCAF11-215ENST00000551391 WASHC2CQ9Y4E1 1318 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 H0Y858 1186 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 MAFGO15525 162 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 PRKD3O94806 890 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 KLHL18O94889 574 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 PRPF6O94906 941 aaKnown RBP4.79□□□□□ -1.64
SCAF11-215ENST00000551391 GUCY2FP51841 1108 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 HMGA2P52926 109 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 BCAR1P56945 870 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 NFATC3Q12968 1075 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 MYBPC3Q14896 1274 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 FAM26FQ5R3K3 315 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 KIAA1841Q6NSI8 718 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 HDGFL2Q7Z4V5 671 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-215ENST00000551391 ZCCHC14Q8WYQ9 949 aaKnown RBP4.79□□□□□ -1.64
SCAF11-215ENST00000551391 DVL3Q92997 716 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-215ENST00000551391 SORCS2Q96PQ0 1159 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 TOPORSQ9NS56 1045 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-215ENST00000551391 HOMER2Q9NSB8 354 aa4.79□□□□□ -1.64
SCAF11-215ENST00000551391 MROH6A6NGR9 719 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 DDX3XO00571 662 aaKnown RBP eCLIP4.78□□□□□ -1.64
SCAF11-215ENST00000551391 KDM1AO60341 852 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 CUTAO60888 179 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 RGS3P49796 1198 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 ERVK-21P61565 698 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 ADCY2Q08462 1091 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 PDCD1Q15116 288 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 WDR72Q3MJ13 1102 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 PHF19Q5T6S3 580 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 MCTP2Q6DN12 878 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 TRMT10BQ6PF06 316 aaKnown RBP4.78□□□□□ -1.64
SCAF11-215ENST00000551391 CXorf67Q86X51 503 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-215ENST00000551391 LMBR1Q8WVP7 490 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 RSAD2Q8WXG1 361 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 RPGRQ92834 1020 aaKnown RBP4.78□□□□□ -1.64
SCAF11-215ENST00000551391 AHCYL2Q96HN2 611 aaKnown RBP4.78□□□□□ -1.64
SCAF11-215ENST00000551391 YTHDC1Q96MU7 727 aaKnown RBP4.78□□□□□ -1.64
SCAF11-215ENST00000551391 ACAP3Q96P50 834 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 ORAI2Q96SN7 254 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 MYL10Q9BUA6 226 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-215ENST00000551391 SEMA4AQ9H3S1 761 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 POFUT1Q9H488 388 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 L2HGDHQ9H9P8 463 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 VTA1Q9NP79 307 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 KCMF1Q9P0J7 381 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 DENND2AQ9ULE3 1009 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 INVSQ9Y283 1065 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 NUMBLQ9Y6R0 609 aa4.78□□□□□ -1.64
SCAF11-215ENST00000551391 ELL2O00472 640 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-215ENST00000551391 C6P13671 934 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 POLD1P28340 1107 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 MANFP55145 182 aaKnown RBP4.77□□□□□ -1.65
SCAF11-215ENST00000551391 EVA1CP58658 441 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 CD83Q01151 205 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 MAP3K12Q12852 859 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 TOP3AQ13472 1001 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-215ENST00000551391 MTMR1Q13613 665 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 NOLC1Q14978 699 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCAF11-215ENST00000551391 EIF4HQ15056 248 aaKnown RBP4.77□□□□□ -1.65
SCAF11-215ENST00000551391 SURF1Q15526 300 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 INAVAQ3KP66 663 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 PRAMEF9Q5VWM5 478 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 TMEM200BQ69YZ2 307 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 USP51Q70EK9 711 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 BMP8AQ7Z5Y6 402 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 REXO1L1PQ8IX06 675 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 CNTD1Q8N815 330 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 SH3RF3Q8TEJ3 882 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-215ENST00000551391 COG1Q8WTW3 980 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 PUS7Q96PZ0 661 aaKnown RBP4.77□□□□□ -1.65
SCAF11-215ENST00000551391 TRIM8Q9BZR9 551 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 HAPLN2Q9GZV7 340 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 KATNBL1Q9H079 304 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 MS4A5Q9H3V2 200 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 DDX56Q9NY93 547 aaKnown RBP4.77□□□□□ -1.65
SCAF11-215ENST00000551391 FTSJ1Q9UET6 329 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 ST6GALNAC2Q9UJ37 374 aa4.77□□□□□ -1.65
SCAF11-215ENST00000551391 A0A0A6YYJ9 748 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 A0A0G2JNJ9 132 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 EXOSC10Q01780 885 aaKnown RBP4.76□□□□□ -1.65
SCAF11-215ENST00000551391 FSCN1Q16658 493 aaKnown RBP4.76□□□□□ -1.65
SCAF11-215ENST00000551391 ZBTB41Q5SVQ8 909 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 SYDE2Q5VT97 1194 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 GRAMD4Q6IC98 578 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 Q6ZUG5 572 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 KLHL36Q8N4N3 616 aa4.76□□□□□ -1.65
SCAF11-215ENST00000551391 TXNDC5Q8NBS9 432 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms