RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 GTPBP10A4D1E9 387 aaKnown RBP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 CTAGE9A4FU28 777 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 SOWAHBA6NEL2 793 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 RBAK-RBAKDNI3L0D1 243 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 PJA2O43164 708 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 KRT86O43790 486 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 DKC1O60832 514 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 IPO7O95373 1038 aaKnown RBP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 SERPING1P05155 500 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 PSAPP07602 524 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 SUPT20HL2P0C7V6 817 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 EDNRBP24530 442 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 NF2P35240 595 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 ACTR2P61160 394 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 IRX3P78415 501 aaPredicted RBP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 GTF2BQ00403 316 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 AMPD2Q01433 879 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 PPIL2Q13356 520 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 ASIC2Q16515 512 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 GNPTABQ3T906 1256 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 TDRD12Q587J7 1177 aaKnown RBP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 KLHDC7AQ5VTJ3 777 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 ABHD15Q6UXT9 468 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 GBP6Q6ZN66 633 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 HAUS6Q7Z4H7 955 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 SYCP3Q8IZU3 236 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 PDCL2Q8N4E4 241 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 ATP6V0A1Q93050 837 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 HVCN1Q96D96 273 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 ASCC2Q9H1I8 757 aaPredicted RBP12.6□□□□□ -0.39
RAB5C-208ENST00000551338 TMEM206Q9H813 350 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 XPNPEP1Q9NQW7 623 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 AIPL1Q9NZN9 384 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 CDC23Q9UJX2 597 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 FBXL5Q9UKA1 691 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 AGTPBP1Q9UPW5 1226 aa12.6□□□□□ -0.39
RAB5C-208ENST00000551338 TISP43B9A030 160 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 SLC16A4O15374 487 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 AKR1B10O60218 316 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 SORBS3O60504 671 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 UCHL3P15374 230 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 FMO5P49326 533 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 PEX3P56589 373 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 SP2Q02086 613 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 PRKCEQ02156 737 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 SP4Q02446 784 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 PPP2R5AQ15172 486 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 SPA17Q15506 151 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 STXBP2Q15833 593 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 SLC9C1Q4G0N8 1177 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 SWSAP1Q6NVH7 229 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
RAB5C-208ENST00000551338 FAM133AQ8N9E0 248 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 TMEM174Q8WUU8 243 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 BSNDQ8WZ55 320 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 PAGR1Q9BTK6 254 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 TSGA10Q9BZW7 698 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 R3HDMLQ9H3Y0 253 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 PDLIM7Q9NR12 457 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 GCNT4Q9P109 453 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 CGNQ9P2M7 1197 aaKnown RBP12.59□□□□□ -0.39
RAB5C-208ENST00000551338 MYO6Q9UM54 1294 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 PCDHA13Q9Y5I0 950 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 SYNGAP1Q96PV0 1343 aa12.59□□□□□ -0.39
RAB5C-208ENST00000551338 EFCAB8A8MWE9 144 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
RAB5C-208ENST00000551338 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
RAB5C-208ENST00000551338 ATG7O95352 703 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 TRIM49P0CI25 452 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 TRIM49CP0CI26 452 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 GJA5P36382 358 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 JAM2P57087 298 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 GFPT1Q06210 699 aaPredicted RBP12.58□□□□□ -0.4
RAB5C-208ENST00000551338 BFSP1Q12934 665 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 TUBB2AQ13885 445 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 TTLL12Q14166 644 aaPredicted RBP12.58□□□□□ -0.4
RAB5C-208ENST00000551338 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 IQCEQ6IPM2 695 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 GPAT2Q6NUI2 795 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 MIS18BP1Q6P0N0 1132 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 OTUD6AQ7L8S5 288 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 TRMT1LQ7Z2T5 733 aaKnown RBP12.58□□□□□ -0.4
RAB5C-208ENST00000551338 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 EHBP1Q8NDI1 1231 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 ZNF526Q8TF50 670 aaPredicted RBP12.58□□□□□ -0.4
RAB5C-208ENST00000551338 OPTNQ96CV9 577 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 CEP170P1Q96L14 293 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 FGD4Q96M96 766 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 CBWD1Q9BRT8 395 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 TUBB2BQ9BVA1 445 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 IFIH1Q9BYX4 1025 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms