RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 MGEA5O60502 916 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 EOMESO95936 686 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 RFC5P40937 340 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 SAFBQ15424 915 aaKnown RBP eCLIP22.36■■□□□ 1.17
GCN1-207ENST00000550471 TCEAL5Q5H9L2 206 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 PDE12Q6L8Q7 609 aaKnown RBP22.36■■□□□ 1.17
GCN1-207ENST00000550471 C4orf19Q8IY42 314 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 NSUN7Q8NE18 718 aaKnown RBP22.36■■□□□ 1.17
GCN1-207ENST00000550471 NEK9Q8TD19 979 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 LLPHQ9BRT6 129 aaKnown RBP22.36■■□□□ 1.17
GCN1-207ENST00000550471 TMEM117Q9H0C3 514 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 VAV3Q9UKW4 847 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 LIMCH1Q9UPQ0 1083 aa22.36■■□□□ 1.17
GCN1-207ENST00000550471 GRM6O15303 877 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 FDPSP14324 419 aaKnown RBP22.35■■□□□ 1.17
GCN1-207ENST00000550471 LAG3P18627 525 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 KCNA5P22460 613 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 SPOUT1Q5T280 376 aaKnown RBP22.35■■□□□ 1.17
GCN1-207ENST00000550471 ABI1Q8IZP0 508 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 ZSCAN31Q96LW9 406 aaPredicted RBP22.35■■□□□ 1.17
GCN1-207ENST00000550471 TRAIPQ9BWF2 469 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 ZSWIM4Q9H7M6 989 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 CYP26B1Q9NR63 512 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 WDR81Q562E7 1941 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 LOXHD1Q8IVV2 1947 aa22.35■■□□□ 1.17
GCN1-207ENST00000550471 TBKBP1A7MCY6 615 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 STBD1O95210 358 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 PAN2Q504Q3 1202 aaKnown RBP22.34■■□□□ 1.17
GCN1-207ENST00000550471 NECAB1Q8N987 351 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 OXER1Q8TDS5 423 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 TCP11Q8WWU5 503 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 GJA10Q969M2 543 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 CEP89Q96ST8 783 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 PPP1R16BQ96T49 567 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 C1QTNF1Q9BXJ1 281 aa22.34■■□□□ 1.17
GCN1-207ENST00000550471 SUCLA2Q9P2R7 463 aaPredicted RBP22.34■■□□□ 1.17
GCN1-207ENST00000550471 A0A0U1RQF3 1178 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 ASAP2O43150 1006 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 PPM1AP35813 382 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 ORC2Q13416 577 aaPredicted RBP22.33■■□□□ 1.17
GCN1-207ENST00000550471 PCBP1Q15365 356 aaKnown RBP eCLIP22.33■■□□□ 1.17
GCN1-207ENST00000550471 ANO5Q75V66 913 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 KLHL23Q8NBE8 558 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 SPPL3Q8TCT6 385 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 HAS1Q92839 578 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 TNFRSF25Q93038 417 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 MRPL9Q9BYD2 267 aaKnown RBP22.33■■□□□ 1.17
GCN1-207ENST00000550471 PUF60Q9UHX1 559 aaKnown RBP22.33■■□□□ 1.17
GCN1-207ENST00000550471 PCDHA12Q9UN75 941 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 LZTS1Q9Y250 596 aa22.33■■□□□ 1.17
GCN1-207ENST00000550471 ITGB1P05556 798 aa22.32■■□□□ 1.16
GCN1-207ENST00000550471 HMGN5P82970 282 aaKnown RBP22.32■■□□□ 1.16
GCN1-207ENST00000550471 ECHDC2Q86YB7 292 aa22.32■■□□□ 1.16
GCN1-207ENST00000550471 DIS3L2Q8IYB7 885 aaKnown RBP22.32■■□□□ 1.16
GCN1-207ENST00000550471 LRRC43Q8N309 656 aa22.32■■□□□ 1.16
GCN1-207ENST00000550471 CEP170P1Q96L14 293 aa22.32■■□□□ 1.16
GCN1-207ENST00000550471 SH2B1Q9NRF2 756 aaPredicted RBP22.32■■□□□ 1.16
GCN1-207ENST00000550471 PRKAG3Q9UGI9 489 aa22.32■■□□□ 1.16
GCN1-207ENST00000550471 BRWD1Q9NSI6 2320 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 EML1O00423 815 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 RAB27AP51159 221 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 POLGP54098 1239 aaPredicted RBP22.31■■□□□ 1.16
GCN1-207ENST00000550471 CALCRLQ16602 461 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 CTC1Q2NKJ3 1217 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 PTCRAQ6ISU1 281 aaPredicted RBP22.31■■□□□ 1.16
GCN1-207ENST00000550471 POTEDQ86YR6 584 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 POF1BQ8WVV4 589 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 PSPC1Q8WXF1 523 aaKnown RBP22.31■■□□□ 1.16
GCN1-207ENST00000550471 CDCA3Q99618 268 aaPredicted RBP22.31■■□□□ 1.16
GCN1-207ENST00000550471 LXNQ9BS40 222 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 DHX33Q9H6R0 707 aaKnown RBP22.31■■□□□ 1.16
GCN1-207ENST00000550471 ALG13Q9NP73 1137 aaKnown RBP22.31■■□□□ 1.16
GCN1-207ENST00000550471 CLDND1Q9NY35 253 aa22.31■■□□□ 1.16
GCN1-207ENST00000550471 GRXCR2A6NFK2 248 aa22.3■■□□□ 1.16
GCN1-207ENST00000550471 LYPLA2O95372 231 aa22.3■■□□□ 1.16
GCN1-207ENST00000550471 YWHABP31946 246 aaKnown RBP22.3■■□□□ 1.16
GCN1-207ENST00000550471 NR5A1Q13285 461 aa22.3■■□□□ 1.16
GCN1-207ENST00000550471 FAM102BQ5T8I3 360 aa22.3■■□□□ 1.16
GCN1-207ENST00000550471 SRGAP1Q7Z6B7 1085 aa22.3■■□□□ 1.16
GCN1-207ENST00000550471 RHPN2Q8IUC4 686 aa22.3■■□□□ 1.16
GCN1-207ENST00000550471 THNSL1Q8IYQ7 743 aa22.3■■□□□ 1.16
GCN1-207ENST00000550471 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.3■■□□□ 1.16
GCN1-207ENST00000550471 GJB4Q9NTQ9 266 aa22.3■■□□□ 1.16
GCN1-207ENST00000550471 TYW1Q9NV66 732 aaKnown RBP22.3■■□□□ 1.16
GCN1-207ENST00000550471 VCANP13611 3396 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 A0A087WZ62 844 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 BTBD18B2RXH4 712 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 NEMFO60524 1076 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 LARGE1O95461 756 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 XRCC6P12956 609 aaKnown RBP eCLIP22.29■■□□□ 1.16
GCN1-207ENST00000550471 PLCB3Q01970 1234 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 KRT17Q04695 432 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 BMS1Q14692 1282 aaKnown RBP22.29■■□□□ 1.16
GCN1-207ENST00000550471 NCAPH2Q6IBW4 605 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 COLGALT1Q8NBJ5 622 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 FDXACB1Q9BRP7 624 aaPredicted RBP22.29■■□□□ 1.16
GCN1-207ENST00000550471 DAXXQ9UER7 740 aaPredicted RBP22.29■■□□□ 1.16
GCN1-207ENST00000550471 COL4A3BPQ9Y5P4 624 aa22.29■■□□□ 1.16
GCN1-207ENST00000550471 SRGAP2BP0DMP2 458 aa22.28■■□□□ 1.16
GCN1-207ENST00000550471 IBSPP21815 317 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms