RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 ELAC1Q9H777 363 aaKnown RBP17.07■□□□□ 0.32
SVOP-203ENST00000550436 FAM217BQ9NTX9 383 aaPredicted RBP17.07■□□□□ 0.32
SVOP-203ENST00000550436 LZTS1Q9Y250 596 aa17.07■□□□□ 0.32
SVOP-203ENST00000550436 HCFC2Q9Y5Z7 792 aa17.07■□□□□ 0.32
SVOP-203ENST00000550436 CLASP2O75122 1294 aaKnown RBP17.06■□□□□ 0.32
SVOP-203ENST00000550436 CDC27P30260 824 aa17.06■□□□□ 0.32
SVOP-203ENST00000550436 NLRP11P59045 1033 aaKnown RBP17.06■□□□□ 0.32
SVOP-203ENST00000550436 ASCL5Q7RTU5 278 aa17.06■□□□□ 0.32
SVOP-203ENST00000550436 ECHDC2Q86YB7 292 aa17.06■□□□□ 0.32
SVOP-203ENST00000550436 TMEM105Q8N8V8 129 aa17.06■□□□□ 0.32
SVOP-203ENST00000550436 CRYGNQ8WXF5 182 aa17.06■□□□□ 0.32
SVOP-203ENST00000550436 AUTS2Q8WXX7 1259 aa17.06■□□□□ 0.32
SVOP-203ENST00000550436 PUF60Q9UHX1 559 aaKnown RBP17.06■□□□□ 0.32
SVOP-203ENST00000550436 MAFBQ9Y5Q3 323 aaPredicted RBP17.06■□□□□ 0.32
SVOP-203ENST00000550436 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 IPO5O00410 1097 aaKnown RBP17.05■□□□□ 0.32
SVOP-203ENST00000550436 CSDE1O75534 798 aaKnown RBP17.05■□□□□ 0.32
SVOP-203ENST00000550436 RTN1Q16799 776 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 NIPA1Q7RTP0 329 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 SLC39A11Q8N1S5 342 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 HELQQ8TDG4 1101 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
SVOP-203ENST00000550436 NGRNQ9NPE2 291 aaKnown RBP17.05■□□□□ 0.32
SVOP-203ENST00000550436 BARHL2Q9NY43 387 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 SPG21Q9NZD8 308 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 GABBR1Q9UBS5 961 aa17.05■□□□□ 0.32
SVOP-203ENST00000550436 GALR2O43603 387 aaPredicted RBP17.04■□□□□ 0.32
SVOP-203ENST00000550436 HMGB1P09429 215 aaKnown RBP17.04■□□□□ 0.32
SVOP-203ENST00000550436 SRGAP2BP0DMP2 458 aa17.04■□□□□ 0.32
SVOP-203ENST00000550436 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
SVOP-203ENST00000550436 AP3B2Q13367 1082 aa17.04■□□□□ 0.32
SVOP-203ENST00000550436 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
SVOP-203ENST00000550436 EFCAB12Q6NXP0 572 aa17.04■□□□□ 0.32
SVOP-203ENST00000550436 TMEM173Q86WV6 379 aaPredicted RBP17.04■□□□□ 0.32
SVOP-203ENST00000550436 LRRC43Q8N309 656 aa17.04■□□□□ 0.32
SVOP-203ENST00000550436 MRPL43Q8N983 215 aaKnown RBP17.04■□□□□ 0.32
SVOP-203ENST00000550436 ZNF577Q9BSK1 485 aa17.04■□□□□ 0.32
SVOP-203ENST00000550436 AKT3Q9Y243 479 aa17.04■□□□□ 0.32
SVOP-203ENST00000550436 ZBTB43O43298 467 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 ZNF862O60290 1169 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 HOXB8P17481 243 aaPredicted RBP17.03■□□□□ 0.32
SVOP-203ENST00000550436 CA8P35219 290 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 LONRF3Q496Y0 759 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 BLOC1S2Q6QNY1 142 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 ZNF598Q86UK7 904 aaKnown RBP17.03■□□□□ 0.32
SVOP-203ENST00000550436 CASP10Q92851 521 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 ADAM7Q9H2U9 754 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
SVOP-203ENST00000550436 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
SVOP-203ENST00000550436 LIMD1Q9UGP4 676 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 SORCS3Q9UPU3 1222 aa17.03■□□□□ 0.32
SVOP-203ENST00000550436 GVINP1Q7Z2Y8 2422 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 FSD2A1L4K1 749 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 GOLGA8AA7E2F4 631 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 EPB41L2O43491 1005 aaKnown RBP17.02■□□□□ 0.32
SVOP-203ENST00000550436 EDIL3O43854 480 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 CXCL14O95715 111 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 CYP3A4P08684 503 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 EPCAMP16422 314 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 ZSCAN20P17040 1043 aaPredicted RBP17.02■□□□□ 0.32
SVOP-203ENST00000550436 EIF4BP23588 611 aaKnown RBP17.02■□□□□ 0.32
SVOP-203ENST00000550436 FGD1P98174 961 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 KRT17Q04695 432 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 DRP2Q13474 957 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 SMC1AQ14683 1233 aaKnown RBP17.02■□□□□ 0.32
SVOP-203ENST00000550436 UGCGQ16739 394 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 Q6ZUG5 572 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 ABI1Q8IZP0 508 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 BCL7CQ8WUZ0 217 aaPredicted RBP17.02■□□□□ 0.32
SVOP-203ENST00000550436 GJA10Q969M2 543 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 NR2E1Q9Y466 385 aa17.02■□□□□ 0.32
SVOP-203ENST00000550436 PSAPP07602 524 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
SVOP-203ENST00000550436 PPM1AP35813 382 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 GPC3P51654 580 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 BCAR1P56945 870 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 MTMR3Q13615 1198 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 PRR16Q569H4 304 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 CES5AQ6NT32 575 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 ZNF746Q6NUN9 644 aaPredicted RBP17.01■□□□□ 0.31
SVOP-203ENST00000550436 BRF1Q92994 677 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 LPPQ93052 612 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
SVOP-203ENST00000550436 PCDHA10Q9Y5I2 948 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
SVOP-203ENST00000550436 TMEM150BA6NC51 233 aa17■□□□□ 0.31
SVOP-203ENST00000550436 MEIS3P2A8K0S8 358 aa17■□□□□ 0.31
SVOP-203ENST00000550436 PROB1E7EW31 1015 aa17■□□□□ 0.31
SVOP-203ENST00000550436 MAGEB2O15479 319 aa17■□□□□ 0.31
SVOP-203ENST00000550436 HOXA2O43364 376 aa17■□□□□ 0.31
SVOP-203ENST00000550436 DARSP14868 501 aaKnown RBP17■□□□□ 0.31
SVOP-203ENST00000550436 PSMA5P28066 241 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms