RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ATP6V0A4Q9HBG4 840 aa25.08■■□□□ 1.61
BRF1-216ENST00000550208 CFAP45Q9UL16 551 aa25.08■■□□□ 1.61
BRF1-216ENST00000550208 NOC2LQ9Y3T9 749 aaKnown RBP25.08■■□□□ 1.61
BRF1-216ENST00000550208 ARID2Q68CP9 1835 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 PPP6R2O75170 966 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 IKBKEQ14164 716 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 TMEM119Q4V9L6 283 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 MAEAQ7L5Y9 396 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 TCP11Q8WWU5 503 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 CDK5RAP3Q96JB5 506 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 IFIH1Q9BYX4 1025 aaKnown RBP25.07■■□□□ 1.6
BRF1-216ENST00000550208 CCSER1Q9C0I3 900 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 LOXHD1Q8IVV2 1947 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 TRIOBPQ9H2D6 2365 aa25.07■■□□□ 1.6
BRF1-216ENST00000550208 A0A087WZ62 844 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 SLC26A4O43511 780 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 GAS2O43903 313 aaKnown RBP25.06■■□□□ 1.6
BRF1-216ENST00000550208 CYP11B2P19099 503 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 NUCB2P80303 420 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 CDC42EP1Q00587 391 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 KARSQ15046 597 aaKnown RBP25.06■■□□□ 1.6
BRF1-216ENST00000550208 ZNF710Q8N1W2 664 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 USP38Q8NB14 1042 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 NLRP7Q8WX94 980 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 PSPC1Q8WXF1 523 aaKnown RBP25.06■■□□□ 1.6
BRF1-216ENST00000550208 SYMPKQ92797 1274 aaKnown RBP25.06■■□□□ 1.6
BRF1-216ENST00000550208 CALML4Q96GE6 196 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 FDXACB1Q9BRP7 624 aaPredicted RBP25.06■■□□□ 1.6
BRF1-216ENST00000550208 NT5C3AQ9H0P0 336 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 MTIF3Q9H2K0 278 aaKnown RBP25.06■■□□□ 1.6
BRF1-216ENST00000550208 POLD4Q9HCU8 107 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 RCOR1Q9UKL0 485 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 PADI3Q9ULW8 664 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 COL4A3BPQ9Y5P4 624 aa25.06■■□□□ 1.6
BRF1-216ENST00000550208 ABHD14A-ACY1A0A1B0GW23 586 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 RPS6KA5O75582 802 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 BAIAP3O94812 1187 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 SRGAP2CP0DJJ0 459 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 ARL2P36404 184 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 LAMTOR4Q0VGL1 99 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 LRIT3Q3SXY7 679 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 LRRC15Q8TF66 581 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 SCLT1Q96NL6 688 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 GPRC5CQ9NQ84 441 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 SLC4A7Q9Y6M7 1214 aa25.05■■□□□ 1.6
BRF1-216ENST00000550208 GRXCR1A8MXD5 290 aa25.04■■□□□ 1.6
BRF1-216ENST00000550208 ASAP2O43150 1006 aa25.04■■□□□ 1.6
BRF1-216ENST00000550208 CSDE1O75534 798 aaKnown RBP25.04■■□□□ 1.6
BRF1-216ENST00000550208 EIF4BP23588 611 aaKnown RBP25.04■■□□□ 1.6
BRF1-216ENST00000550208 NFX1Q12986 1120 aaKnown RBP25.04■■□□□ 1.6
BRF1-216ENST00000550208 FAM109BQ6ICB4 259 aaPredicted RBP25.04■■□□□ 1.6
BRF1-216ENST00000550208 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.04■■□□□ 1.6
BRF1-216ENST00000550208 KCTD17Q8N5Z5 321 aa25.04■■□□□ 1.6
BRF1-216ENST00000550208 ASAP3Q8TDY4 903 aa25.04■■□□□ 1.6
BRF1-216ENST00000550208 APBB2Q92870 758 aa25.04■■□□□ 1.6
BRF1-216ENST00000550208 NLRP4Q96MN2 994 aa25.04■■□□□ 1.6
BRF1-216ENST00000550208 ERVK-5Q9HDB9 667 aa25.04■■□□□ 1.6
BRF1-216ENST00000550208 ST3GAL5Q9UNP4 418 aa25.04■■□□□ 1.6
BRF1-216ENST00000550208 DARSP14868 501 aaKnown RBP25.03■■□□□ 1.6
BRF1-216ENST00000550208 NCLP19338 710 aaKnown RBP25.03■■□□□ 1.6
BRF1-216ENST00000550208 WDR5P61964 334 aaKnown RBP25.03■■□□□ 1.6
BRF1-216ENST00000550208 PAK2Q13177 524 aa25.03■■□□□ 1.6
BRF1-216ENST00000550208 FAM102BQ5T8I3 360 aa25.03■■□□□ 1.6
BRF1-216ENST00000550208 FAM228AQ86W67 206 aa25.03■■□□□ 1.6
BRF1-216ENST00000550208 RASSF8Q8NHQ8 419 aa25.03■■□□□ 1.6
BRF1-216ENST00000550208 GCOM2Q9BZD3 368 aaPredicted RBP25.03■■□□□ 1.6
BRF1-216ENST00000550208 POLR3FQ9H1D9 316 aaPredicted RBP25.03■■□□□ 1.6
BRF1-216ENST00000550208 BLOC1S4Q9NUP1 217 aa25.03■■□□□ 1.6
BRF1-216ENST00000550208 PCDHA7Q9UN72 937 aa25.03■■□□□ 1.6
BRF1-216ENST00000550208 ATP6V1DQ9Y5K8 247 aa25.03■■□□□ 1.6
BRF1-216ENST00000550208 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.02■■□□□ 1.6
BRF1-216ENST00000550208 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.02■■□□□ 1.6
BRF1-216ENST00000550208 SOX1O00570 391 aaPredicted RBP25.02■■□□□ 1.6
BRF1-216ENST00000550208 ENPP3O14638 875 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 CUTAO60888 179 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 SSBP05455 408 aaKnown RBP eCLIP25.02■■□□□ 1.6
BRF1-216ENST00000550208 PLA2G4BP0C869 781 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 PLCG1P19174 1290 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 FGFR4P22455 802 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 GLRA2P23416 452 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 AXDND1Q5T1B0 1012 aaPredicted RBP25.02■■□□□ 1.6
BRF1-216ENST00000550208 RINT1Q6NUQ1 792 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 RTN4RL1Q86UN2 441 aaPredicted RBP25.02■■□□□ 1.6
BRF1-216ENST00000550208 ZNF410Q86VK4 478 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 SYT2Q8N9I0 419 aaPredicted RBP25.02■■□□□ 1.6
BRF1-216ENST00000550208 MCPH1Q8NEM0 835 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 KCNG4Q8TDN1 519 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 RUSC1Q9BVN2 902 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 PANK2Q9BZ23 570 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 TMX1Q9H3N1 280 aa25.02■■□□□ 1.6
BRF1-216ENST00000550208 GPR182O15218 404 aa25.01■■□□□ 1.59
BRF1-216ENST00000550208 KCNJ6P48051 423 aa25.01■■□□□ 1.59
BRF1-216ENST00000550208 KRT85P78386 507 aa25.01■■□□□ 1.59
BRF1-216ENST00000550208 DEFB103AP81534 67 aa25.01■■□□□ 1.59
BRF1-216ENST00000550208 MXD4Q14582 209 aaPredicted RBP25.01■■□□□ 1.59
BRF1-216ENST00000550208 C1orf186Q6ZWK4 172 aa25.01■■□□□ 1.59
BRF1-216ENST00000550208 RNF149Q8NC42 400 aa25.01■■□□□ 1.59
BRF1-216ENST00000550208 IFT122Q9HBG6 1241 aa25.01■■□□□ 1.59
BRF1-216ENST00000550208 TSHZ2Q9NRE2 1034 aa25.01■■□□□ 1.59
BRF1-216ENST00000550208 CCDC39Q9UFE4 941 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms