RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	RHPN2	Q8IUC4	686 aa		13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	NPAS4	Q8IUM7	802 aa		13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	TCP11	Q8WWU5	503 aa		13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	PSPC1	Q8WXF1	523 aa	Known RBP	13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RAB34	Q9BZG1	259 aa		13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	C1orf112	Q9NSG2	853 aa		13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RNF216	Q9NWF9	866 aa	Predicted RBP	13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SI	P14410	1827 aa		13.33	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	COL4A6	Q14031	1691 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	VPS37C	A5D8V6	355 aa	Predicted RBP	13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ZBTB39	O15060	712 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	DGAT1	O75907	488 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	STAG3L1	P0CL83	205 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	XRCC6	P12956	609 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RPA1	P27694	616 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	PDIA5	Q14554	519 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CATSPER3	Q86XQ3	398 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MAFA	Q8NHW3	353 aa	Predicted RBP	13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	PIGO	Q8TEQ8	1089 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ARNTL2	Q8WYA1	636 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ZNF668	Q96K58	619 aa	Predicted RBP	13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	NLRP4	Q96MN2	994 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	TGS1	Q96RS0	853 aa	Known RBP	13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MTR	Q99707	1265 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ADAM2	Q99965	735 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CERS4	Q9HA82	394 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RGS18	Q9NS28	235 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	LRWD1	Q9UFC0	647 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	COL4A3BP	Q9Y5P4	624 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	STK24	Q9Y6E0	443 aa		13.32	□□□□□ -0.28
ARFGAP1-223	ENST00000550188		A0A087WZ62	844 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MGEA5	O60502	916 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MED24	O75448	989 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MUT	P22033	750 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SFPQ	P23246	707 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SARS	P49591	514 aa	Known RBP	13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RARRES1	P49788	294 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ERVK-21	P61565	698 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	POTEG	Q6S5H5	508 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SLC24A5	Q71RS6	500 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SPRED2	Q7Z698	418 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CRIPAK	Q8N1N5	446 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	IGSF22	Q8N9C0	903 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	PRPF31	Q8WWY3	499 aa	Known RBP	13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	TMEM143	Q96AN5	459 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	NACC1	Q96RE7	527 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	INO80B	Q9C086	356 aa	Predicted RBP	13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RC3H2	Q9HBD1	1191 aa	Known RBP	13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ATP6V0A4	Q9HBG4	840 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	DBR1	Q9UK59	544 aa	Known RBP	13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	LRFN2	Q9ULH4	789 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ADGRA3	Q8IWK6	1321 aa		13.31	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	EPOP	A6NHQ4	379 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188		C9IYK1	514 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ASAP2	O43150	1006 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	DGKI	O75912	1065 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ZSCAN20	P17040	1043 aa	Predicted RBP	13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	IGFBP4	P22692	258 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CCT6A	P40227	531 aa	Known RBP	13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	NUCB2	P80303	420 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ATP2C1	P98194	919 aa	Predicted RBP	13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	LAMTOR4	Q0VGL1	99 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ADGRE1	Q14246	886 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	DSC3	Q14574	896 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MXD4	Q14582	209 aa	Predicted RBP	13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	DTHD1	Q6ZMT9	781 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	KSR1	Q8IVT5	923 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	FIBCD1	Q8N539	461 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ZNF689	Q96CS4	500 aa	Predicted RBP	13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SAMD11	Q96NU1	681 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	XPNPEP1	Q9NQW7	623 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MTUS1	Q9ULD2	1270 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	PCDHB7	Q9Y5E2	793 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	KAT6A	Q92794	2004 aa		13.3	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MICAL3	Q7RTP6	2002 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	STX6	O43752	255 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	GTPBP6	O43824	516 aa	Predicted RBP	13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	USO1	O60763	962 aa	Known RBP	13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	BMP15	O95972	392 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SYT1	P21579	422 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	FGFR4	P22455	802 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	BTG3	Q14201	252 aa	Predicted RBP	13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	KRT79	Q5XKE5	535 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	FERMT3	Q86UX7	667 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CMTR2	Q8IYT2	770 aa	Known RBP	13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	FBXO22	Q8NEZ5	403 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SNX29	Q8TEQ0	813 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	C17orf80	Q9BSJ5	609 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	IFT122	Q9HBG6	1241 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CHST12	Q9NRB3	414 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	FOXD4L1	Q9NU39	408 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	DACT1	Q9NYF0	836 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RWDD3	Q9Y3V2	267 aa		13.29	□□□□□ -0.28

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