RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 NT5DC3Q86UY8 548 aa17.51■□□□□ 0.39
CNOT2-209ENST00000548159 SLC30A5Q8TAD4 765 aa17.51■□□□□ 0.39
CNOT2-209ENST00000548159 PBKQ96KB5 322 aa17.51■□□□□ 0.39
CNOT2-209ENST00000548159 RASSF4Q9H2L5 321 aa17.51■□□□□ 0.39
CNOT2-209ENST00000548159 AGPAT3Q9NRZ7 376 aa17.51■□□□□ 0.39
CNOT2-209ENST00000548159 AMACRQ9UHK6 382 aa17.51■□□□□ 0.39
CNOT2-209ENST00000548159 EIF3HO15372 352 aaKnown RBP eCLIP17.5■□□□□ 0.39
CNOT2-209ENST00000548159 SOX5P35711 763 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 VPS36Q86VN1 386 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 ZNF577Q9BSK1 485 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 GLIS2Q9BZE0 524 aaPredicted RBP17.5■□□□□ 0.39
CNOT2-209ENST00000548159 TAF1DQ9H5J8 278 aaPredicted RBP17.5■□□□□ 0.39
CNOT2-209ENST00000548159 TAS2R14Q9NYV8 317 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 TMX2Q9Y320 296 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 NR2E1Q9Y466 385 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 FERP16591 822 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 FLT3P36888 993 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 IFI16Q16666 785 aaKnown RBP17.5■□□□□ 0.39
CNOT2-209ENST00000548159 ARHGAP44Q17R89 818 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 MREGQ8N565 214 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 OR2W6PQ8NHA6 318 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.5■□□□□ 0.391e-6■■□□□ 13.4
CNOT2-209ENST00000548159 SH2D3AQ9BRG2 576 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 ISCUQ9H1K1 167 aa17.5■□□□□ 0.39
CNOT2-209ENST00000548159 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
CNOT2-209ENST00000548159 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 PGRMC1O00264 195 aaKnown RBP17.49■□□□□ 0.39
CNOT2-209ENST00000548159 KRIT1O00522 736 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 CES2O00748 559 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 BUB1BO60566 1050 aaPredicted RBP17.49■□□□□ 0.39
CNOT2-209ENST00000548159 MIGA2Q7L4E1 593 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 DAW1Q8N136 415 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 SLC35G2Q8TBE7 412 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 HOOK2Q96ED9 719 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 RNPC3Q96LT9 517 aaKnown RBP17.49■□□□□ 0.39
CNOT2-209ENST00000548159 CELF4Q9BZC1 486 aaKnown RBP17.49■□□□□ 0.39
CNOT2-209ENST00000548159 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 FRMPD4Q14CM0 1322 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 APBA3O96018 575 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 ZNF131P52739 623 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 DLG4P78352 724 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 NAA35Q5VZE5 725 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 PHLDB3Q6NSJ2 640 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 WHAMMQ8TF30 809 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 LXNQ9BS40 222 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 STK33Q9BYT3 514 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 ARHGEF10LQ9HCE6 1279 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 DMAC2Q9NW81 257 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 PLAAQ9Y263 795 aa17.49■□□□□ 0.39
CNOT2-209ENST00000548159 SKOR1P84550 965 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 GUCY1A3Q02108 690 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 HS2ST1Q7LGA3 356 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 TRMT1LQ7Z2T5 733 aaKnown RBP17.48■□□□□ 0.39
CNOT2-209ENST00000548159 ARHGEF26Q96DR7 871 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 NACC1Q96RE7 527 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 SYT11Q9BT88 431 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 PCIF1Q9H4Z3 704 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 SAMM50Q9Y512 469 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 PPP1R12BO60237 982 aaPredicted RBP17.48■□□□□ 0.39
CNOT2-209ENST00000548159 ZEB2O60315 1214 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 VIL1P09327 827 aaKnown RBP17.48■□□□□ 0.39
CNOT2-209ENST00000548159 CORO7P57737 925 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 MAPK7Q13164 816 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 UAP1Q16222 522 aaPredicted RBP17.48■□□□□ 0.39
CNOT2-209ENST00000548159 MAATS1Q7Z4T9 603 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 ADAT2Q7Z6V5 191 aaKnown RBP17.48■□□□□ 0.39
CNOT2-209ENST00000548159 C7orf43Q8WVR3 580 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 HES6Q96HZ4 224 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 INTS2Q9H0H0 1204 aaKnown RBP17.48■□□□□ 0.39
CNOT2-209ENST00000548159 SUCLA2Q9P2R7 463 aaPredicted RBP17.48■□□□□ 0.39
CNOT2-209ENST00000548159 ZBTB21Q9ULJ3 1066 aa17.48■□□□□ 0.39
CNOT2-209ENST00000548159 IPO5O00410 1097 aaKnown RBP17.47■□□□□ 0.39
CNOT2-209ENST00000548159 TTI1O43156 1089 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 DAPK3O43293 454 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 HIP1RO75146 1068 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 COPB2P35606 906 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 HSD17B3P37058 310 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 HSPA9P38646 679 aaKnown RBP17.47■□□□□ 0.39
CNOT2-209ENST00000548159 CEP85LQ5SZL2 805 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 ZSWIM2Q8NEG5 633 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 RANBP17Q9H2T7 1088 aaKnown RBP17.47■□□□□ 0.39
CNOT2-209ENST00000548159 SEPT11Q9NVA2 429 aaKnown RBP17.47■□□□□ 0.39
CNOT2-209ENST00000548159 FRMD4BQ9Y2L6 1034 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 A0A0A6YYK5 440 aaPredicted RBP17.47■□□□□ 0.39
CNOT2-209ENST00000548159 FOXN3O00409 490 aaPredicted RBP17.47■□□□□ 0.39
CNOT2-209ENST00000548159 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 EXOC3O60645 756 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 ITGB5P18084 799 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 DCAF12L1Q5VU92 463 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 SYCP3Q8IZU3 236 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 RASGEF1CQ8N431 466 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 MKNK1Q9BUB5 465 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.47■□□□□ 0.397e-6■■■■■ 74.5
CNOT2-209ENST00000548159 APEX2Q9UBZ4 518 aa17.47■□□□□ 0.39
CNOT2-209ENST00000548159 HERC5Q9UII4 1024 aaKnown RBP17.47■□□□□ 0.39
CNOT2-209ENST00000548159 SCAF8Q9UPN6 1271 aaKnown RBP17.47■□□□□ 0.39
CNOT2-209ENST00000548159 RAD17O75943 681 aa17.46■□□□□ 0.39
CNOT2-209ENST00000548159 NFIL3Q16649 462 aa17.46■□□□□ 0.39
CNOT2-209ENST00000548159 TBC1D10BQ4KMP7 808 aaPredicted RBP17.46■□□□□ 0.39
CNOT2-209ENST00000548159 B3GNT9Q6UX72 402 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms