RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 KDM3AQ9Y4C1 1321 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 H3BQ06 376 aaPredicted RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 MAGEB2O15479 319 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 ZNF862O60290 1169 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 MGEA5O60502 916 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 GPR32O75388 356 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 TDP2O95551 362 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 OATP04181 439 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 TMOD1P28289 359 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 SARSP49591 514 aaKnown RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 NLRP11P59045 1033 aaKnown RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 SCRN1Q12765 414 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 UGCGQ16739 394 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 INF2Q27J81 1249 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 LEXMQ3ZCV2 418 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 TIGD5Q53EQ6 642 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 ODR4Q5SWX8 454 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 SPOUT1Q5T280 376 aaKnown RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 FAM102BQ5T8I3 360 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 PTCRAQ6ISU1 281 aaPredicted RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 PADI6Q6TGC4 694 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 MIER3Q7Z3K6 550 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 CMTR2Q8IYT2 770 aaKnown RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 LRRC71Q8N4P6 559 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 SLC5A5Q92911 643 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 CLP1Q92989 425 aaKnown RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 FAM167AQ96KS9 214 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 SH2D3AQ9BRG2 576 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 TEKT3Q9BXF9 490 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 C22orf23Q9BZE7 217 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 UNC45AQ9H3U1 944 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 NSUN3Q9H649 340 aaKnown RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 RC3H2Q9HBD1 1191 aaKnown RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 RGS18Q9NS28 235 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 GJB4Q9NTQ9 266 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 CLDND1Q9NY35 253 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 TPCN1Q9ULQ1 816 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 PLAGL2Q9UPG8 496 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 RWDD3Q9Y3V2 267 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 MRPL42Q9Y6G3 142 aaKnown RBP7.56□□□□□ -1.2
SCAF11-211ENST00000547950 MYH6P13533 1939 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 VCANP13611 3396 aa7.56□□□□□ -1.2
SCAF11-211ENST00000547950 TTC28Q96AY4 2481 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 CYP3A7-CYP3A51PA0A087WV96 503 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 CCDC194A0A1B0GVG4 234 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 TMEM150BA6NC51 233 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 TBKBP1A7MCY6 615 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 DDX11L8A8MPP1 907 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 C5orf67F2Z3F1 127 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 M0R2N6 131 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 MARCH6O60337 910 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 PSMD10O75832 226 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 CDKL5O76039 1030 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 LINC00271P0C7V0 271 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 XBP1P17861 261 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 CYP3A7P24462 503 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 SFNP31947 248 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 JAK3P52333 1124 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 PRKCEQ02156 737 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 TBC1D8BQ0IIM8 1120 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 NONOQ15233 471 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCAF11-211ENST00000547950 NPY5RQ15761 445 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 LETM2Q2VYF4 491 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 Q4G0T1 1027 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 GALNT17Q6IS24 598 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 SLC24A5Q71RS6 500 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 FAM228AQ86W67 206 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 CRIPAKQ8N1N5 446 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 NECAB1Q8N987 351 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 KLHL23Q8NBE8 558 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 SPPL3Q8TCT6 385 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 SCLT1Q96NL6 688 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 MAP7D2Q96T17 732 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 EPHX3Q9H6B9 360 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 ATP6V0A4Q9HBG4 840 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 C1orf112Q9NSG2 853 aa7.55□□□□□ -1.2
SCAF11-211ENST00000547950 DDX25Q9UHL0 483 aaKnown RBP7.55□□□□□ -1.2
SCAF11-211ENST00000547950 TRIP12Q14669 1992 aaPredicted RBP7.55□□□□□ -1.2
SCAF11-211ENST00000547950 MYH7BA7E2Y1 1941 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 TANC1Q9C0D5 1861 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 PRRC2BQ5JSZ5 2229 aaKnown RBP7.54□□□□□ -1.2
SCAF11-211ENST00000547950 C9IYK1 514 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 NCK2O43639 380 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 PFKFB2O60825 505 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 CSDE1O75534 798 aaKnown RBP7.54□□□□□ -1.2
SCAF11-211ENST00000547950 ITGB1P05556 798 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 FGFR1P11362 822 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 IL9P15248 144 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 ZSCAN20P17040 1043 aaPredicted RBP7.54□□□□□ -1.2
SCAF11-211ENST00000547950 FGFR4P22455 802 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 EIF4BP23588 611 aaKnown RBP7.54□□□□□ -1.2
SCAF11-211ENST00000547950 DNAJB1P25685 340 aa7.54□□□□□ -1.2
SCAF11-211ENST00000547950 SSTR3P32745 418 aaPredicted RBP7.54□□□□□ -1.2
SCAF11-211ENST00000547950 GTF2F1P35269 517 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCAF11-211ENST00000547950 MLLT3P42568 568 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms