RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 RIN1Q13671 783 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 MRM1Q6IN84 353 aaKnown RBP3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 LARP4Q71RC2 724 aaKnown RBP eCLIP3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 RPUSD2Q8IZ73 545 aaKnown RBP3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 LENG9Q96B70 501 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 CD244Q9BZW8 370 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 OR10A5Q9H207 317 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 NRDE2Q9H7Z3 1164 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 KIAA1522Q9P206 1035 aaPredicted RBP3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 SETBP1Q9Y6X0 1596 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 CPS1P31327 1500 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 ATP10AO60312 1499 aa3.79□□□□□ -1.8
DEPDC4-204ENST00000547823 PTPRKQ15262 1439 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 C9orf84Q5VXU9 1444 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 A0A1W2PRX2 142 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 AQP7O14520 342 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 GSTA4O15217 222 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 NUDT3O95989 172 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 PDE6AP16499 860 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 CD38P28907 300 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 ECE1P42892 770 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 FSTL1Q12841 308 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 IFRD2Q12894 506 aaPredicted RBP3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 PAK1Q13153 545 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 GRAMD4Q6IC98 578 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 OR14K1Q8NGZ2 314 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 IPPKQ9H8X2 491 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 GPRC5BQ9NZH0 403 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 PACSIN3Q9UKS6 424 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 FAM184BQ9ULE4 1060 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 CCDC9Q9Y3X0 531 aaKnown RBP3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 ATP10BO94823 1461 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 KIF27Q86VH2 1401 aa3.78□□□□□ -1.8
DEPDC4-204ENST00000547823 ZNF142P52746 1687 aaPredicted RBP3.78□□□□□ -1.81
DEPDC4-204ENST00000547823 GJB6O95452 261 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 C1QTNF8P60827 252 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 HDLBPQ00341 1268 aaKnown RBP3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 KANK2Q63ZY3 851 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 SPTY2D1Q68D10 685 aaPredicted RBP3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 KCNT2Q6UVM3 1135 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 GSPT2Q8IYD1 628 aaKnown RBP3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 CALML6Q8TD86 181 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 SH3RF2Q8TEC5 729 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 SLC25A43Q8WUT9 341 aaPredicted RBP3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 FBXW5Q969U6 566 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 MRRFQ96E11 262 aaKnown RBP3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 TMEM176AQ96HP8 235 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 RIOX1Q9H6W3 641 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 BTBD7Q9P203 1132 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 R3HCC1Q9Y3T6 440 aaKnown RBP3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 PLA2R1Q13018 1463 aa3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 TCOF1Q13428 1488 aaKnown RBP3.77□□□□□ -1.81
DEPDC4-204ENST00000547823 POLR1AO95602 1720 aaPredicted RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 CTTNBP2Q8WZ74 1663 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 SHANK2Q9UPX8 1470 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 RAPGEF2Q9Y4G8 1499 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 TRAV20A0A0B4J274 112 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 PRAMEF25A6NGN4 478 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 FAM90A27PA6NNH2 459 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 GOLGA6L6A8MZA4 724 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 PRODHO43272 600 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 CLASP2O75122 1294 aaKnown RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 H2AFYO75367 372 aaKnown RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 CDK4P11802 303 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 PABPC1P11940 636 aaKnown RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 IL12RB1P42701 662 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 TAP1Q03518 808 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 MOGSQ13724 837 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 TOB2Q14106 344 aaPredicted RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 PTPAQ15257 358 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 LY6G5CQ5SRR4 150 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 MFSD5Q6N075 450 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 NSMFQ6X4W1 530 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 ARHGAP36Q6ZRI8 547 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 MAMDC2Q7Z304 686 aaPredicted RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 MRGPREQ86SM8 312 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 LRRC47Q8N1G4 583 aaKnown RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 GFM2Q969S9 779 aaKnown RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 SLC7A6OSQ96CW6 309 aaPredicted RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 SLC6A15Q9H2J7 730 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 ADARB2Q9NS39 739 aaKnown RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 ZNHIT2Q9UHR6 403 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 CDC42EP3Q9UKI2 254 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 SH3BP1Q9Y3L3 701 aa3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 CTDP1Q9Y5B0 961 aaPredicted RBP3.76□□□□□ -1.81
DEPDC4-204ENST00000547823 MROH2AA6NES4 1674 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 GOLGA3Q08378 1498 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 MYO3AQ8NEV4 1616 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 ZAR1LA6NP61 321 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 MAN2B1O00754 1011 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 APPP05067 770 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 PROZP22891 400 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 SCNN1GP51170 649 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 C21orf58P58505 322 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 ST5P78524 1137 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 SLC25A3Q00325 362 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 CD83Q01151 205 aa3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 GNL2Q13823 731 aaKnown RBP3.75□□□□□ -1.81
DEPDC4-204ENST00000547823 NTRK3Q16288 839 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms