RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 ITGB3BPQ13352 177 aaPredicted RBP15.35■□□□□ 0.05
CCDC59-202ENST00000547758 RARS2Q5T160 578 aaKnown RBP15.35■□□□□ 0.05
CCDC59-202ENST00000547758 KIAA1841Q6NSI8 718 aa15.35■□□□□ 0.05
CCDC59-202ENST00000547758 ABI1Q8IZP0 508 aa15.35■□□□□ 0.05
CCDC59-202ENST00000547758 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
CCDC59-202ENST00000547758 FLCNQ8NFG4 579 aa15.35■□□□□ 0.05
CCDC59-202ENST00000547758 LIMD1Q9UGP4 676 aa15.35■□□□□ 0.05
CCDC59-202ENST00000547758 DBR1Q9UK59 544 aaKnown RBP15.35■□□□□ 0.05
CCDC59-202ENST00000547758 FANCMQ8IYD8 2048 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 BACH1O14867 736 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 ARP10275 920 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 CA8P35219 290 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 PTH1RQ03431 593 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 ZNF484Q5JVG2 852 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 FAM160B1Q5W0V3 765 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 MB21D2Q8IYB1 491 aaPredicted RBP15.34■□□□□ 0.05
CCDC59-202ENST00000547758 SLC39A11Q8N1S5 342 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 AGO4Q9HCK5 861 aaKnown RBP15.34■□□□□ 0.05
CCDC59-202ENST00000547758 USTQ9Y2C2 406 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 CEP250Q9BV73 2442 aa15.34■□□□□ 0.05
CCDC59-202ENST00000547758 hCG_1642624A0A1W2PR95 340 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 ZBTB42B2RXF5 422 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 GPR32O75388 356 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 EOMESO95936 686 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 CCNE2O96020 404 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 VTNP04004 478 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 AOC1P19801 751 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 CEP55Q53EZ4 464 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 ATAT1Q5SQI0 421 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 ABHD15Q6UXT9 468 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 CCDC60Q8IWA6 550 aaPredicted RBP15.33■□□□□ 0.04
CCDC59-202ENST00000547758 CCDC105Q8IYK2 499 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 C12orf76Q8N812 135 aaPredicted RBP15.33■□□□□ 0.04
CCDC59-202ENST00000547758 RWDD1Q9H446 243 aaPredicted RBP15.33■□□□□ 0.04
CCDC59-202ENST00000547758 DZANK1Q9NVP4 752 aa15.33■□□□□ 0.04
CCDC59-202ENST00000547758 DDX39AO00148 427 aaKnown RBP15.32■□□□□ 0.04
CCDC59-202ENST00000547758 C22orf31O95567 290 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 RXRAP19793 462 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 BMS1Q14692 1282 aaKnown RBP15.32■□□□□ 0.04
CCDC59-202ENST00000547758 ANGPT1Q15389 498 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 CLLU1OSQ5K130 101 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 PDXDC2PQ6P474 469 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 HEATR3Q7Z4Q2 680 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 ECHDC2Q86YB7 292 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 ZNF302Q9NR11 478 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 CYP26B1Q9NR63 512 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 BOLA1Q9Y3E2 137 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 FRYLO94915 3013 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 OTOGLQ3ZCN5 2332 aa15.32■□□□□ 0.04
CCDC59-202ENST00000547758 NCOR2Q9Y618 2525 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.31■□□□□ 0.04
CCDC59-202ENST00000547758 PI15O43692 258 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 CXCL14O95715 111 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 ZSCAN20P17040 1043 aaPredicted RBP15.31■□□□□ 0.04
CCDC59-202ENST00000547758 NPR3P17342 541 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 KANK3Q6NY19 840 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 CASC1Q6TDU7 716 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 NFXL1Q6ZNB6 911 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 METTL13Q8N6R0 699 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 RNF169Q8NCN4 708 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 PGBD1Q96JS3 809 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 RTP3Q9BQQ7 232 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 DOCK8Q8NF50 2099 aa15.31■□□□□ 0.04
CCDC59-202ENST00000547758 CCDC69A6NI79 296 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 MEIS1O00470 390 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 TPRP12270 2363 aaKnown RBP15.3■□□□□ 0.04
CCDC59-202ENST00000547758 EPCAMP16422 314 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 ATP4AP20648 1035 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 ALDH7A1P49419 539 aaKnown RBP15.3■□□□□ 0.04
CCDC59-202ENST00000547758 METAP2P50579 478 aaKnown RBP eCLIP15.3■□□□□ 0.04
CCDC59-202ENST00000547758 MIS18BP1Q6P0N0 1132 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 CKAP2LQ8IYA6 745 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 CCDC82Q8N4S0 544 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 DTWD2Q8NBA8 298 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 TMEM87AQ8NBN3 555 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 RUFY2Q8WXA3 655 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 ACSF2Q96CM8 615 aaPredicted RBP15.3■□□□□ 0.04
CCDC59-202ENST00000547758 TMEM169Q96HH4 297 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 MTA3Q9BTC8 594 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 MRPL9Q9BYD2 267 aaKnown RBP15.3■□□□□ 0.04
CCDC59-202ENST00000547758 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 ZBP1Q9H171 429 aa15.3■□□□□ 0.04
CCDC59-202ENST00000547758 MED19A0JLT2 244 aaPredicted RBP15.29■□□□□ 0.04
CCDC59-202ENST00000547758 NT5C1B-RDH14C9J2C7 533 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
CCDC59-202ENST00000547758 PRC1O43663 620 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 IGHDP01880 384 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 CALM1P0DP23 149 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 CALM2P0DP24 149 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 CALM3P0DP25 149 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 CLCN3P51790 818 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 BCAR1P56945 870 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 TDGQ13569 410 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 AAMPQ13685 434 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 SWSAP1Q6NVH7 229 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 TMC5Q6UXY8 1006 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 TMTC3Q6ZXV5 915 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 SIX5Q8N196 739 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 VPS52Q8N1B4 723 aa15.29■□□□□ 0.04
CCDC59-202ENST00000547758 TMTC2Q8N394 836 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms