RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 LRRC10BA6NIK2 292 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 WDR64B1ANS9 1081 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 ZBTB39O15060 712 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 TEX33O43247 280 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 SNAI1O95863 264 aaPredicted RBP18.09■□□□□ 0.49
BRF1-208ENST00000546997 UGCGQ16739 394 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 LY6KQ17RY6 165 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 ZNF746Q6NUN9 644 aaPredicted RBP18.09■□□□□ 0.49
BRF1-208ENST00000546997 MAMDC4Q6UXC1 1216 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 PACS2Q86VP3 889 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 USP6NLQ92738 828 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 KATNBL1Q9H079 304 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 DEF6Q9H4E7 631 aa18.09■□□□□ 0.49
BRF1-208ENST00000546997 DIS3Q9Y2L1 958 aaKnown RBP18.09■□□□□ 0.49
BRF1-208ENST00000546997 MAP2K2P36507 400 aa18.08■□□□□ 0.49
BRF1-208ENST00000546997 JAK3P52333 1124 aa18.08■□□□□ 0.49
BRF1-208ENST00000546997 CAP1Q01518 475 aa18.08■□□□□ 0.49
BRF1-208ENST00000546997 SV2BQ7L1I2 683 aa18.08■□□□□ 0.49
BRF1-208ENST00000546997 TMTC1Q8IUR5 882 aa18.08■□□□□ 0.49
BRF1-208ENST00000546997 PIGOQ8TEQ8 1089 aa18.08■□□□□ 0.49
BRF1-208ENST00000546997 RPGRIP1Q96KN7 1286 aa18.08■□□□□ 0.49
BRF1-208ENST00000546997 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.08■□□□□ 0.49
BRF1-208ENST00000546997 LIMA1Q9UHB6 759 aaKnown RBP18.08■□□□□ 0.49
BRF1-208ENST00000546997 GJD2Q9UKL4 321 aa18.08■□□□□ 0.49
BRF1-208ENST00000546997 MYMKA6NI61 221 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 TRPA1O75762 1119 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 FARP2O94887 1054 aaPredicted RBP18.08■□□□□ 0.48
BRF1-208ENST00000546997 SSBP05455 408 aaKnown RBP eCLIP18.08■□□□□ 0.48
BRF1-208ENST00000546997 PLA2G4BP0C869 781 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 TGFB3P10600 412 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 LACTBP83111 547 aaPredicted RBP18.08■□□□□ 0.48
BRF1-208ENST00000546997 TRIM47Q96LD4 638 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 CEP89Q96ST8 783 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 MYCBPQ99417 103 aaPredicted RBP18.08■□□□□ 0.48
BRF1-208ENST00000546997 TINF2Q9BSI4 451 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 DESI2Q9BSY9 194 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 FLRT1Q9NZU1 646 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 TCEAL9Q9UHQ7 104 aa18.08■□□□□ 0.48
BRF1-208ENST00000546997 ARID2Q68CP9 1835 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 BRCA2P51587 3418 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 TARSL2A2RTX5 802 aaKnown RBP18.07■□□□□ 0.48
BRF1-208ENST00000546997 HOXC6P09630 235 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 SFNP31947 248 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 SLC12A3P55017 1021 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 ACTR2P61160 394 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 SPAG1Q07617 926 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 STIM1Q13586 685 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 FILIP1LQ4L180 1135 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 ZNF569Q5MCW4 686 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 TAPT1Q6NXT6 567 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 CCDC62Q6P9F0 684 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 RAD9BQ6WBX8 426 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 AFAP1L1Q8TED9 768 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 CCDC47Q96A33 483 aaKnown RBP18.07■□□□□ 0.48
BRF1-208ENST00000546997 RNF186Q9NXI6 227 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 PUF60Q9UHX1 559 aaKnown RBP18.07■□□□□ 0.48
BRF1-208ENST00000546997 DNM3Q9UQ16 869 aa18.07■□□□□ 0.48
BRF1-208ENST00000546997 MFAP3LO75121 409 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 GGPS1O95749 300 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 P4HBP07237 508 aaKnown RBP18.06■□□□□ 0.48
BRF1-208ENST00000546997 CYP2B6P20813 491 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 PSMC4P43686 418 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 VSNL1P62760 191 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 ASIC1P78348 528 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 KRT31Q15323 416 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 CCL14Q16627 93 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 NEK9Q8TD19 979 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 BHMT2Q9H2M3 363 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 PCDHA10Q9Y5I2 948 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 MYH11P35749 1972 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 TRIM49BA6NDI0 452 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 SOWAHDA6NJG2 315 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 SHOX2O60902 331 aaPredicted RBP18.06■□□□□ 0.48
BRF1-208ENST00000546997 HSPA6P17066 643 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 QARSP47897 775 aaKnown RBP18.06■□□□□ 0.48
BRF1-208ENST00000546997 PMS1P54277 932 aaKnown RBP18.06■□□□□ 0.48
BRF1-208ENST00000546997 C1QTNF8P60827 252 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 TRIM14Q14142 442 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 NEDD9Q14511 834 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 TCP11X2Q5H9J9 407 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 DYMQ7RTS9 669 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 CCDC60Q8IWA6 550 aaPredicted RBP18.06■□□□□ 0.48
BRF1-208ENST00000546997 SCFD2Q8WU76 684 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 SOCS4Q8WXH5 440 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 COPS5Q92905 334 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 VTA1Q9NP79 307 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 LZTFL1Q9NQ48 299 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 EXOC1Q9NV70 894 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 SLC5A4Q9NY91 659 aa18.06■□□□□ 0.48
BRF1-208ENST00000546997 CASP8AP2Q9UKL3 1982 aa18.05■□□□□ 0.48
BRF1-208ENST00000546997 SYNGAP1Q96PV0 1343 aa18.05■□□□□ 0.48
BRF1-208ENST00000546997 PSMA7O14818 248 aa18.05■□□□□ 0.48
BRF1-208ENST00000546997 PRPF6O94906 941 aaKnown RBP18.05■□□□□ 0.48
BRF1-208ENST00000546997 TXNP10599 105 aaKnown RBP18.05■□□□□ 0.48
BRF1-208ENST00000546997 STK4Q13043 487 aa18.05■□□□□ 0.48
BRF1-208ENST00000546997 GJC2Q5T442 439 aaPredicted RBP18.05■□□□□ 0.48
BRF1-208ENST00000546997 METTL7BQ6UX53 244 aa18.05■□□□□ 0.48
BRF1-208ENST00000546997 ABHD15Q6UXT9 468 aa18.05■□□□□ 0.48
BRF1-208ENST00000546997 TADA2BQ86TJ2 420 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms