RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 MTERF2Q49AM1 385 aa16.17■□□□□ 0.18
COL2A1-209ENST00000546974 SPOUT1Q5T280 376 aaKnown RBP16.17■□□□□ 0.18
COL2A1-209ENST00000546974 NEK8Q86SG6 692 aa16.17■□□□□ 0.18
COL2A1-209ENST00000546974 GJD3Q8N144 294 aa16.17■□□□□ 0.18
COL2A1-209ENST00000546974 WASF1Q92558 559 aa16.17■□□□□ 0.18
COL2A1-209ENST00000546974 FAM20AQ96MK3 541 aa16.17■□□□□ 0.18
COL2A1-209ENST00000546974 EPHX3Q9H6B9 360 aa16.17■□□□□ 0.18
COL2A1-209ENST00000546974 KCNMB3Q9NPA1 279 aa16.17■□□□□ 0.18
COL2A1-209ENST00000546974 HOXA2O43364 376 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 SLC37A4O43826 429 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
COL2A1-209ENST00000546974 CSPG5O95196 566 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 CTDNEP1O95476 244 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 AK2P54819 239 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 PSMC5P62195 406 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 PPP2R5CQ13362 524 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 ADAM15Q13444 863 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 CSPP1Q1MSJ5 1256 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 NLRP7Q8WX94 980 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 ZNF668Q96K58 619 aaPredicted RBP16.16■□□□□ 0.18
COL2A1-209ENST00000546974 NAP1L4Q99733 375 aaKnown RBP16.16■□□□□ 0.18
COL2A1-209ENST00000546974 TMEM117Q9H0C3 514 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 IGFLR1Q9H665 355 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 TYW1Q9NV66 732 aaKnown RBP16.16■□□□□ 0.18
COL2A1-209ENST00000546974 ORC3Q9UBD5 711 aaPredicted RBP16.16■□□□□ 0.18
COL2A1-209ENST00000546974 PRKAG3Q9UGI9 489 aa16.16■□□□□ 0.18
COL2A1-209ENST00000546974 DDX11L8A8MPP1 907 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 PI4K2BG5E9Z4 385 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 EML1O00423 815 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 TBX3O15119 743 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 DKC1O60832 514 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL2A1-209ENST00000546974 MAFO75444 373 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-209ENST00000546974 FGFR1P11362 822 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 GTF2F1P35269 517 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL2A1-209ENST00000546974 IRS1P35568 1242 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 DNM2P50570 870 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 DLX2Q07687 328 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-209ENST00000546974 DRP2Q13474 957 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 ECHDC2Q86YB7 292 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 COLGALT1Q8NBJ5 622 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 KHSRPQ92945 711 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL2A1-209ENST00000546974 SCLT1Q96NL6 688 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 JPH2Q9BR39 696 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-209ENST00000546974 GCOM2Q9BZD3 368 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-209ENST00000546974 CWH43Q9H720 699 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 GJB4Q9NTQ9 266 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 VAV3Q9UKW4 847 aa16.15■□□□□ 0.18
COL2A1-209ENST00000546974 TMEM150BA6NC51 233 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 CCNT1O60563 726 aaKnown RBP16.14■□□□□ 0.17
COL2A1-209ENST00000546974 FGF18O76093 207 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 FDPSP14324 419 aaKnown RBP16.14■□□□□ 0.17
COL2A1-209ENST00000546974 LAG3P18627 525 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 SSTR3P32745 418 aaPredicted RBP16.14■□□□□ 0.17
COL2A1-209ENST00000546974 QARSP47897 775 aaKnown RBP16.14■□□□□ 0.17
COL2A1-209ENST00000546974 PIK3AP1Q6ZUJ8 805 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 ANO5Q75V66 913 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 ADGRD2Q7Z7M1 963 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 EFHBQ8N7U6 833 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 CASD1Q96PB1 797 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 SH2D3AQ9BRG2 576 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 RNF19AQ9NV58 838 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 DACT1Q9NYF0 836 aa16.14■□□□□ 0.17
COL2A1-209ENST00000546974 A0A0U1RQF3 1178 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 LINC01565O15544 149 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 MBTPS2O43462 519 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 GPR37L1O60883 481 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 TBX10O75333 385 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 EOMESO95936 686 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 P4HBP07237 508 aaKnown RBP16.13■□□□□ 0.17
COL2A1-209ENST00000546974 FGFR4P22455 802 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 SMAD2Q15796 467 aaKnown RBP16.13■□□□□ 0.17
COL2A1-209ENST00000546974 ME3Q16798 604 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 PDE12Q6L8Q7 609 aaKnown RBP16.13■□□□□ 0.17
COL2A1-209ENST00000546974 LRRC55Q6ZSA7 311 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 ZNF410Q86VK4 478 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 THNSL1Q8IYQ7 743 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 ABI1Q8IZP0 508 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 HAS1Q92839 578 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 GTF3C6Q969F1 213 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 INO80BQ9C086 356 aaPredicted RBP16.13■□□□□ 0.17
COL2A1-209ENST00000546974 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 CHST12Q9NRB3 414 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 SUCLA2Q9P2R7 463 aaPredicted RBP16.13■□□□□ 0.17
COL2A1-209ENST00000546974 HCSTQ9UBK5 93 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 CD207Q9UJ71 328 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 LZTS1Q9Y250 596 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 PPME1Q9Y570 386 aa16.13■□□□□ 0.17
COL2A1-209ENST00000546974 TRIOO75962 3097 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 A0A087WZ62 844 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 MARCH6O60337 910 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 DTNBO60941 627 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 CSDE1O75534 798 aaKnown RBP16.12■□□□□ 0.17
COL2A1-209ENST00000546974 KRT2P35908 639 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 NRIP1P48552 1158 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 NDUFV1P49821 464 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 ZP2Q05996 745 aa16.12■□□□□ 0.17
COL2A1-209ENST00000546974 SMAD4Q13485 552 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms