RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 H3BQV1 296 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 GTPBP6O43824 516 aaPredicted RBP17.76■□□□□ 0.43
DDX54-204ENST00000546898 DARSP14868 501 aaKnown RBP17.76■□□□□ 0.43
DDX54-204ENST00000546898 IGFBP4P22692 258 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 SARSP49591 514 aaKnown RBP17.76■□□□□ 0.43
DDX54-204ENST00000546898 DRP2Q13474 957 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 CUL4AQ13619 759 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 XKR9Q5GH70 373 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 SPRED2Q7Z698 418 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 CRIPAKQ8N1N5 446 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 ZNF689Q96CS4 500 aaPredicted RBP17.76■□□□□ 0.43
DDX54-204ENST00000546898 TUFT1Q9NNX1 390 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 RGS18Q9NS28 235 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 ANKEF1Q9NU02 776 aa17.76■□□□□ 0.43
DDX54-204ENST00000546898 SUCLA2Q9P2R7 463 aaPredicted RBP17.76■□□□□ 0.43
DDX54-204ENST00000546898 LAD1O00515 517 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 DGKIO75912 1065 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 RILPL1Q5EBL4 403 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 MCTP1Q6DN14 999 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 FIBCD1Q8N539 461 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 ERMNQ8TAM6 284 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 TCP11Q8WWU5 503 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 ADAM2Q99965 735 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 GCOM2Q9BZD3 368 aaPredicted RBP17.75■□□□□ 0.43
DDX54-204ENST00000546898 INO80BQ9C086 356 aaPredicted RBP17.75■□□□□ 0.43
DDX54-204ENST00000546898 RWDD3Q9Y3V2 267 aa17.75■□□□□ 0.43
DDX54-204ENST00000546898 MGEA5O60502 916 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 XRCC6P12956 609 aaKnown RBP eCLIP17.74■□□□□ 0.43
DDX54-204ENST00000546898 TOB1P50616 345 aaPredicted RBP17.74■□□□□ 0.43
DDX54-204ENST00000546898 FXR2P51116 673 aaKnown RBP eCLIP17.74■□□□□ 0.434e-8■■■■■ 35.7
DDX54-204ENST00000546898 GRB10Q13322 594 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 DSC3Q14574 896 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 EMC2Q15006 297 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 HAUS3Q68CZ6 603 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 SLC24A5Q71RS6 500 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 RHPN2Q8IUC4 686 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 CMTR2Q8IYT2 770 aaKnown RBP17.74■□□□□ 0.43
DDX54-204ENST00000546898 C4orf32Q8N8J7 132 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 ZNF579Q8NAF0 562 aaKnown RBP17.74■□□□□ 0.43
DDX54-204ENST00000546898 FBXO22Q8NEZ5 403 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 PSPC1Q8WXF1 523 aaKnown RBP17.74■□□□□ 0.43
DDX54-204ENST00000546898 CCDC43Q96MW1 224 aaKnown RBP17.74■□□□□ 0.43
DDX54-204ENST00000546898 MTRQ99707 1265 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 C17orf80Q9BSJ5 609 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 POLR3CQ9BUI4 534 aaPredicted RBP17.74■□□□□ 0.43
DDX54-204ENST00000546898 LMCD1Q9NZU5 365 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 MTUS1Q9ULD2 1270 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 LRFN2Q9ULH4 789 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 COL4A3BPQ9Y5P4 624 aa17.74■□□□□ 0.43
DDX54-204ENST00000546898 A0A087WZ62 844 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 C9IYK1 514 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 RFXAPO00287 272 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 LPXNO60711 386 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 DGAT1O75907 488 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 ZSCAN20P17040 1043 aaPredicted RBP17.73■□□□□ 0.43
DDX54-204ENST00000546898 MUTP22033 750 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 SFPQP23246 707 aaKnown RBP eCLIP17.73■□□□□ 0.43
DDX54-204ENST00000546898 TECP42680 631 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 BTG3Q14201 252 aaPredicted RBP17.73■□□□□ 0.43
DDX54-204ENST00000546898 NBR1Q14596 966 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 LARP1BQ659C4 914 aaKnown RBP17.73■□□□□ 0.43
DDX54-204ENST00000546898 GDPD5Q8WTR4 605 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 ZNF668Q96K58 619 aaPredicted RBP17.73■□□□□ 0.43
DDX54-204ENST00000546898 FDXACB1Q9BRP7 624 aaPredicted RBP17.73■□□□□ 0.43
DDX54-204ENST00000546898 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 ELAC1Q9H777 363 aaKnown RBP17.73■□□□□ 0.43
DDX54-204ENST00000546898 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.73■□□□□ 0.43
DDX54-204ENST00000546898 PCDHB6Q9Y5E3 794 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 MTCH2Q9Y6C9 303 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 STK24Q9Y6E0 443 aa17.73■□□□□ 0.43
DDX54-204ENST00000546898 ZBTB39O15060 712 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 ASAP2O43150 1006 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 SPATA31C1P0DKV0 1188 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 RPA1P27694 616 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 PRPHP41219 470 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 RARRES1P49788 294 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 PTGDRQ13258 359 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 EPC2Q52LR7 807 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 CATSPER3Q86XQ3 398 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 TMEM192Q8IY95 271 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 CLP1Q92989 425 aaKnown RBP17.72■□□□□ 0.43
DDX54-204ENST00000546898 NLRP4Q96MN2 994 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 ATP6V0A4Q9HBG4 840 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 CHST12Q9NRB3 414 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 TMEM161AQ9NX61 479 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 PCDHB7Q9Y5E2 793 aa17.72■□□□□ 0.43
DDX54-204ENST00000546898 ATG2AQ2TAZ0 1938 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 MED24O75448 989 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 PDCP20941 246 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 FAM189BP81408 668 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 PDIA5Q14554 519 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDX54-204ENST00000546898 IGSF22Q8N9C0 903 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 PRPF31Q8WWY3 499 aaKnown RBP17.71■□□□□ 0.43
DDX54-204ENST00000546898 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 INTS4Q96HW7 963 aaKnown RBP17.71■□□□□ 0.43
DDX54-204ENST00000546898 NACC1Q96RE7 527 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 XPNPEP1Q9NQW7 623 aa17.71■□□□□ 0.43
DDX54-204ENST00000546898 BMP2KQ9NSY1 1161 aaPredicted RBP17.71■□□□□ 0.43
DDX54-204ENST00000546898 DACT1Q9NYF0 836 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms