RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CDHR5Q9HBB8 845 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 RCOR1Q9UKL0 485 aa18.7■□□□□ 0.58
CCDC38-203ENST00000546803 CIZ1Q9ULV3 898 aaPredicted RBP18.7■□□□□ 0.58
CCDC38-203ENST00000546803 E9PMD0 336 aa18.69■□□□□ 0.58
CCDC38-203ENST00000546803 EIF4BP23588 611 aaKnown RBP18.69■□□□□ 0.58
CCDC38-203ENST00000546803 MXD4Q14582 209 aaPredicted RBP18.69■□□□□ 0.58
CCDC38-203ENST00000546803 LRIT3Q3SXY7 679 aa18.69■□□□□ 0.58
CCDC38-203ENST00000546803 RASSF8Q8NHQ8 419 aa18.69■□□□□ 0.58
CCDC38-203ENST00000546803 PRPF31Q8WWY3 499 aaKnown RBP18.69■□□□□ 0.58
CCDC38-203ENST00000546803 NLRP7Q8WX94 980 aa18.69■□□□□ 0.58
CCDC38-203ENST00000546803 SCLT1Q96NL6 688 aa18.69■□□□□ 0.58
CCDC38-203ENST00000546803 OSMRQ99650 979 aa18.69■□□□□ 0.58
CCDC38-203ENST00000546803 GCOM2Q9BZD3 368 aaPredicted RBP18.69■□□□□ 0.58
CCDC38-203ENST00000546803 AGO3Q9H9G7 860 aaKnown RBP18.69■□□□□ 0.58
CCDC38-203ENST00000546803 BMP2KQ9NSY1 1161 aaPredicted RBP18.69■□□□□ 0.58
CCDC38-203ENST00000546803 CCDC39Q9UFE4 941 aa18.69■□□□□ 0.58
CCDC38-203ENST00000546803 COL4A3BPQ9Y5P4 624 aa18.69■□□□□ 0.58
CCDC38-203ENST00000546803 DNAH12Q6ZR08 3092 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 ZBBXA8MT70 800 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 GPR182O15218 404 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 CUTAO60888 179 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 RPS6KA5O75582 802 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 ARL2P36404 184 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 PAK2Q13177 524 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 HABP4Q5JVS0 413 aaKnown RBP18.68■□□□□ 0.58
CCDC38-203ENST00000546803 SPECC1Q5M775 1068 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 KCNK18Q7Z418 384 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 SYMPKQ92797 1274 aaKnown RBP18.68■□□□□ 0.58
CCDC38-203ENST00000546803 EPSTI1Q96J88 318 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 PPP1R16BQ96T49 567 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 INO80BQ9C086 356 aaPredicted RBP18.68■□□□□ 0.58
CCDC38-203ENST00000546803 PADI3Q9ULW8 664 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 SLC4A7Q9Y6M7 1214 aa18.68■□□□□ 0.58
CCDC38-203ENST00000546803 MYH9P35579 1960 aaKnown RBP18.68■□□□□ 0.58
CCDC38-203ENST00000546803 DARSP14868 501 aaKnown RBP18.67■□□□□ 0.58
CCDC38-203ENST00000546803 CD52P31358 61 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 POU5F1BQ06416 359 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 LAMTOR4Q0VGL1 99 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 TFDP1Q14186 410 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 KARSQ15046 597 aaKnown RBP18.67■□□□□ 0.58
CCDC38-203ENST00000546803 SYT2Q8N9I0 419 aaPredicted RBP18.67■□□□□ 0.58
CCDC38-203ENST00000546803 PHOSPHO2Q8TCD6 241 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 TMEM40Q8WWA1 233 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 NLRP4Q96MN2 994 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 PLIN2Q99541 437 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 FTHL17Q9BXU8 183 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 SCAND2PQ9GZW5 306 aaPredicted RBP18.67■□□□□ 0.58
CCDC38-203ENST00000546803 KCND2Q9NZV8 630 aa18.67■□□□□ 0.58
CCDC38-203ENST00000546803 CXXC1Q9P0U4 656 aaPredicted RBP18.67■□□□□ 0.58
CCDC38-203ENST00000546803 NOC2LQ9Y3T9 749 aaKnown RBP18.67■□□□□ 0.58
CCDC38-203ENST00000546803 A0A087WZ62 844 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.66■□□□□ 0.58
CCDC38-203ENST00000546803 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.66■□□□□ 0.58
CCDC38-203ENST00000546803 PLA2G4BP0C869 781 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 PLCG1P19174 1290 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
CCDC38-203ENST00000546803 KCNJ6P48051 423 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 ME1P48163 572 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 NFX1Q12986 1120 aaKnown RBP18.66■□□□□ 0.58
CCDC38-203ENST00000546803 TCTN1Q2MV58 587 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 USP49Q70CQ1 688 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 KSR1Q8IVT5 923 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 SLC9A7Q96T83 725 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 FDXACB1Q9BRP7 624 aaPredicted RBP18.66■□□□□ 0.58
CCDC38-203ENST00000546803 TIPINQ9BVW5 301 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 POLR3FQ9H1D9 316 aaPredicted RBP18.66■□□□□ 0.58
CCDC38-203ENST00000546803 ERVK-5Q9HDB9 667 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 STK17AQ9UEE5 414 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 ST3GAL5Q9UNP4 418 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 TRIP12Q14669 1992 aaPredicted RBP18.66■□□□□ 0.58
CCDC38-203ENST00000546803 KAT6AQ92794 2004 aa18.66■□□□□ 0.58
CCDC38-203ENST00000546803 SRGAP2CP0DJJ0 459 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 SLC12A3P55017 1021 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 WDR5P61964 334 aaKnown RBP18.65■□□□□ 0.58
CCDC38-203ENST00000546803 AXDND1Q5T1B0 1012 aaPredicted RBP18.65■□□□□ 0.58
CCDC38-203ENST00000546803 FAM102BQ5T8I3 360 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 RRAGBQ5VZM2 374 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 RINT1Q6NUQ1 792 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 C1orf186Q6ZWK4 172 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 MAEAQ7L5Y9 396 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 SRGAP1Q7Z6B7 1085 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 FAM228AQ86W67 206 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 RNF149Q8NC42 400 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 LEO1Q8WVC0 666 aaPredicted RBP18.65■□□□□ 0.58
CCDC38-203ENST00000546803 KIFAP3Q92845 792 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 ZNF668Q96K58 619 aaPredicted RBP18.65■□□□□ 0.58
CCDC38-203ENST00000546803 SPATA32Q96LK8 384 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 IFT122Q9HBG6 1241 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 PCDHA7Q9UN72 937 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 TANC1Q9C0D5 1861 aa18.65■□□□□ 0.58
CCDC38-203ENST00000546803 AMHP03971 560 aa18.64■□□□□ 0.57
CCDC38-203ENST00000546803 SSBP05455 408 aaKnown RBP eCLIP18.64■□□□□ 0.57
CCDC38-203ENST00000546803 ATP2A2P16615 1042 aaKnown RBP18.64■□□□□ 0.57
CCDC38-203ENST00000546803 GLRA2P23416 452 aa18.64■□□□□ 0.57
CCDC38-203ENST00000546803 GUCY2CP25092 1073 aa18.64■□□□□ 0.57
CCDC38-203ENST00000546803 PHKA2P46019 1235 aa18.64■□□□□ 0.57
CCDC38-203ENST00000546803 SMAD3P84022 425 aaKnown RBP18.64■□□□□ 0.57
CCDC38-203ENST00000546803 PPP2R5AQ15172 486 aa18.64■□□□□ 0.57
CCDC38-203ENST00000546803 IFNLR1Q8IU57 520 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms