RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 TARBP2Q15633 366 aaKnown RBP21.4■■□□□ 1.02
SKP2-208ENST00000546211 CCL14Q16627 93 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 AFG1LQ8WV93 481 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 IFT74Q96LB3 600 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 STRA6Q9BX79 667 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 ST6GALNAC4Q9H4F1 302 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 TMEM206Q9H813 350 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 ERAP1Q9NZ08 941 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 CCDC169A6NNP5 214 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 NR2F2P24468 414 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 RPL13P26373 211 aaKnown RBP21.4■■□□□ 1.02
SKP2-208ENST00000546211 CYP2C19P33261 490 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 GSDMDP57764 484 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 KCNA1Q09470 495 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 ADAM9Q13443 819 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 KIF22Q14807 665 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 PLCB4Q15147 1175 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 PRAMEF19Q5SWL8 479 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 HS2ST1Q7LGA3 356 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 HAUS6Q7Z4H7 955 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 ZC3H3Q8IXZ2 948 aaKnown RBP21.4■■□□□ 1.02
SKP2-208ENST00000546211 EXOC8Q8IYI6 725 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 SYCP3Q8IZU3 236 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 SPIRE2Q8WWL2 714 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 ACCSQ96QU6 501 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 CEP89Q96ST8 783 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 POLR3FQ9H1D9 316 aaPredicted RBP21.4■■□□□ 1.02
SKP2-208ENST00000546211 KMT5AQ9NQR1 393 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 TRPC6Q9Y210 931 aa21.4■■□□□ 1.02
SKP2-208ENST00000546211 PES1O00541 588 aaKnown RBP21.39■■□□□ 1.01
SKP2-208ENST00000546211 SLC16A4O15374 487 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 TEX33O43247 280 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 HBP1O60381 514 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 PPFIA4O75335 1185 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 LGALS2P05162 132 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 NPTX2P47972 431 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 SOX10P56693 466 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 GTF2BQ00403 316 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 CCDC40Q4G0X9 1142 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 SPECC1LQ69YQ0 1117 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 GOLGA5Q8TBA6 731 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 GBP3Q9H0R5 595 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 ZMYM2Q9UBW7 1377 aa21.39■■□□□ 1.01
SKP2-208ENST00000546211 LGALS16A8MUM7 142 aa21.38■■□□□ 1.01
SKP2-208ENST00000546211 MAFO75444 373 aaPredicted RBP21.38■■□□□ 1.01
SKP2-208ENST00000546211 TBC1D8O95759 1140 aa21.38■■□□□ 1.01
SKP2-208ENST00000546211 ZNF865P0CJ78 1059 aaPredicted RBP21.38■■□□□ 1.01
SKP2-208ENST00000546211 XRCC5P13010 732 aaKnown RBP21.38■■□□□ 1.01
SKP2-208ENST00000546211 MAP2K2P36507 400 aa21.38■■□□□ 1.01
SKP2-208ENST00000546211 TBC1D8BQ0IIM8 1120 aa21.38■■□□□ 1.01
SKP2-208ENST00000546211 KSR1Q8IVT5 923 aa21.38■■□□□ 1.01
SKP2-208ENST00000546211 HVCN1Q96D96 273 aa21.38■■□□□ 1.01
SKP2-208ENST00000546211 NOC4LQ9BVI4 516 aaKnown RBP21.38■■□□□ 1.01
SKP2-208ENST00000546211 ARHGAP39Q9C0H5 1083 aa21.38■■□□□ 1.01
SKP2-208ENST00000546211 MGAMO43451 1857 aa21.38■■□□□ 1.01
SKP2-208ENST00000546211 H0YCG3 227 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 TGFB1I1O43294 461 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 GAS2O43903 313 aaKnown RBP21.37■■□□□ 1.01
SKP2-208ENST00000546211 NR3C1P04150 777 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 ABCD1P33897 745 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 SP3Q02447 781 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 UBXN1Q04323 297 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 NFIL3Q16649 462 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 BSNDQ8WZ55 320 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 JPH2Q9BR39 696 aaPredicted RBP21.37■■□□□ 1.01
SKP2-208ENST00000546211 NTPCRQ9BSD7 190 aaKnown RBP21.37■■□□□ 1.01
SKP2-208ENST00000546211 CFHR5Q9BXR6 569 aa21.37■■□□□ 1.01
SKP2-208ENST00000546211 ZNF215Q9UL58 517 aaPredicted RBP21.37■■□□□ 1.01
SKP2-208ENST00000546211 PPP2R5AQ15172 486 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 MAN2A1Q16706 1144 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 DGKDQ16760 1214 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 TMEM161BQ8NDZ6 487 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 TMEM143Q96AN5 459 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 EXOC7Q9UPT5 735 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 DOCK3Q8IZD9 2030 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 CLIC2O15247 247 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 DYNC1LI2O43237 492 aaPredicted RBP21.36■■□□□ 1.01
SKP2-208ENST00000546211 ADCY6O43306 1168 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 IGHA2P01877 340 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 MMP3P08254 477 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 PBX1P40424 430 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 DNM2P50570 870 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 MARSP56192 900 aaKnown RBP21.36■■□□□ 1.01
SKP2-208ENST00000546211 PTPN21Q16825 1174 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 CCDC150Q8NCX0 1101 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 TCP11Q8WWU5 503 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 CGNQ9P2M7 1197 aaKnown RBP21.36■■□□□ 1.01
SKP2-208ENST00000546211 FAM184BQ9ULE4 1060 aa21.36■■□□□ 1.01
SKP2-208ENST00000546211 GNEQ9Y223 722 aaKnown RBP21.36■■□□□ 1.01
SKP2-208ENST00000546211 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.36■■□□□ 1.01
SKP2-208ENST00000546211 DENND3A2RUS2 1198 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 HOXD8P13378 290 aaPredicted RBP21.35■■□□□ 1.01
SKP2-208ENST00000546211 SCP2P22307 547 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 ARL2P36404 184 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 FLT3LGP49771 235 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 SNRPFP62306 86 aaKnown RBP21.35■■□□□ 1.01
SKP2-208ENST00000546211 ZNF484Q5JVG2 852 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 FKBP15Q5T1M5 1219 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 MFSD14CQ5VZR4 134 aa21.35■■□□□ 1.01
SKP2-208ENST00000546211 TLK2Q86UE8 772 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms