RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, human

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-215	ENST00000546191	SLC43A3	Q8NBI5	491 aa		10.63	□□□□□ -0.71
NEK6-215	ENST00000546191	PTPRN2	Q92932	1015 aa		10.63	□□□□□ -0.71
NEK6-215	ENST00000546191	SPZ1	Q9BXG8	430 aa		10.63	□□□□□ -0.71
NEK6-215	ENST00000546191	ETNK2	Q9NVF9	386 aa		10.63	□□□□□ -0.71
NEK6-215	ENST00000546191	RMND1	Q9NWS8	449 aa		10.63	□□□□□ -0.71
NEK6-215	ENST00000546191	DDX25	Q9UHL0	483 aa	Known RBP	10.63	□□□□□ -0.71
NEK6-215	ENST00000546191	SAR1B	Q9Y6B6	198 aa		10.63	□□□□□ -0.71
NEK6-215	ENST00000546191		A0A0J9YVX5	310 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	KLRG2	A4D1S0	409 aa	Predicted RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191		F8W031	263 aa	Predicted RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	PDE2A	O00408	941 aa	Predicted RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	LAD1	O00515	517 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	ATP1A1	P05023	1023 aa	Known RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	GNAZ	P19086	355 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	TMOD1	P28289	359 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CD97	P48960	835 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	USP11	P51784	963 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	GUCY2D	Q02846	1103 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CNPY1	Q3B7I2	92 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SOGA3	Q5TF21	947 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	EMB	Q6PCB8	327 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	MIGA2	Q7L4E1	593 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CPLX4	Q7Z7G2	160 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CCNJL	Q8IV13	435 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	PEX5L	Q8IYB4	626 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	TRMT44	Q8IYL2	757 aa	Known RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	ANKK1	Q8NFD2	765 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	NEDD1	Q8NHV4	660 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	NOC3L	Q8WTT2	800 aa	Known RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	TGFBRAP1	Q8WUH2	860 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	NCSTN	Q92542	709 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	PPP1R14B	Q96C90	147 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CCDC43	Q96MW1	224 aa	Known RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CTAGE1	Q96RT6	745 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SAMSN1	Q9NSI8	373 aa	Known RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	BARHL2	Q9NY43	387 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	TUBA8	Q9NY65	449 aa	Predicted RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	GGA1	Q9UJY5	639 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	DAAM1	Q9Y4D1	1078 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	GAK	O14976	1311 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SNED1	Q8TER0	1413 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	USP17L3	A6NCW0	530 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	USP17L4	A6NCW7	530 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	GSTA2	P09210	222 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	TROVE2	P10155	538 aa	Known RBP eCLIP	10.62	□□□□□ -0.71	7e-6	■□□□□ 11.1
NEK6-215	ENST00000546191	CD44	P16070	742 aa	Known RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	MCM7	P33993	719 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	BTD	P43251	543 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	NEK2	P51955	445 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SULT2A1	Q06520	285 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SLC35G1	Q2M3R5	365 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CMPK2	Q5EBM0	449 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CFAP58	Q5T655	872 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SLC2A7	Q6PXP3	512 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	USP17L1	Q7RTZ2	530 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	TMC4	Q7Z404	712 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	HIC2	Q96JB3	615 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SNX27	Q96L92	541 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	CRAMP1	Q96RY5	1269 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	TMEM47	Q9BQJ4	181 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	TCHP	Q9BT92	498 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	SLC12A6	Q9UHW9	1150 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	USH1C	Q9Y6N9	552 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	FAM205A	Q6ZU69	1335 aa		10.62	□□□□□ -0.71
NEK6-215	ENST00000546191	LRRC37A	A6NMS7	1700 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	BRCA1	P38398	1863 aa	Known RBP	10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	HMGB1P1	B2RPK0	211 aa	Predicted RBP	10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	CYTH3	O43739	400 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	UFL1	O94874	794 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	KRT16	P08779	473 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	PBX1	P40424	430 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	PDE6C	P51160	858 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	GUCY2F	P51841	1108 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	CKAP4	Q07065	602 aa	Known RBP	10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	PAK2	Q13177	524 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	LSAMP	Q13449	338 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	KRT72	Q14CN4	511 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	USH1G	Q495M9	461 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	SH2D4B	Q5SQS7	431 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	TYW1B	Q6NUM6	668 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	SCUBE1	Q8IWY4	988 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	CAGE1	Q8TC20	777 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	CPLX3	Q8WVH0	158 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	RAPGEF5	Q92565	580 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	CAVIN3	Q969G5	261 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	AGBL1	Q96MI9	1066 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	NAA15	Q9BXJ9	866 aa	Known RBP	10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	PFDN4	Q9NQP4	134 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	ARHGEF38	Q9NXL2	777 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	HESX1	Q9UBX0	185 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	SCOC	Q9UIL1	159 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	HEY1	Q9Y5J3	304 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	SLC4A7	Q9Y6M7	1214 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	ITIH6	Q6UXX5	1313 aa		10.61	□□□□□ -0.71
NEK6-215	ENST00000546191	LTBP1	Q14766	1721 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms