RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SPATA31A1Q5TZJ5 1347 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CYP3A7-CYP3A51PA0A087WV96 503 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 PP2D1A8MPX8 630 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 GCOM1H8Y6P7 765 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 PGRMC1O00264 195 aaKnown RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 PDXKO00764 312 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 ZNF185O15231 689 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 SART1O43290 800 aaKnown RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CALUO43852 315 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 RPS6KA4O75676 772 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 HEXIM1O94992 359 aaKnown RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 MYZAPP0CAP1 466 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 FCER1AP12319 257 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 MUTP22033 750 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CYP3A7P24462 503 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 RPL13P26373 211 aaKnown RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 PRDX5P30044 214 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 LSP1P33241 339 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 MDH1P40925 334 aaKnown RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 EPS15P42566 896 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 TECP42680 631 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CCT5P48643 541 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CDK8P49336 464 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 EPHA4P54764 986 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 IFFO1Q0D2I5 559 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 KLHL30Q0D2K2 578 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 COASYQ13057 564 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 AP3B2Q13367 1082 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 ITPK1Q13572 414 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 BMT2Q1RMZ1 405 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 NFRKBQ6P4R8 1299 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 BICDL1Q6ZP65 573 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 RGL4Q8IZJ4 473 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 RASGEF1CQ8N431 466 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 RASGRP4Q8TDF6 673 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 SNX29Q8TEQ0 813 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 SCFD2Q8WU76 684 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CELF1Q92879 486 aaKnown RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CUL5Q93034 780 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 DNAJC19Q96DA6 116 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CABS1Q96KC9 395 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 MBOAT7Q96N66 472 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 ZIM3Q96PE6 472 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 PNMA5Q96PV4 448 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 CDK15Q96Q40 435 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 NCAPGQ9BPX3 1015 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 MLXIPQ9HAP2 919 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 SLC39A2Q9NP94 309 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 RBM12Q9NTZ6 932 aaKnown RBP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 PANK4Q9NVE7 773 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.06□□□□□ -1.28
SNHG1-225ENST00000545920 STX8Q9UNK0 236 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 DUSP10Q9Y6W6 482 aa7.06□□□□□ -1.28
SNHG1-225ENST00000545920 GAKO14976 1311 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 COL24A1Q17RW2 1714 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 DOT1LQ8TEK3 1739 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 SNED1Q8TER0 1413 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 C5orf60A6NFR6 353 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 TRAF5O00463 557 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 BACH1O14867 736 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 PPP1R12BO60237 982 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 PALMO75781 387 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 NOL4O94818 638 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 KIF4AO95239 1232 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 TFRCP02786 760 aaKnown RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 CYP2D6P10635 497 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 VEGFAP15692 232 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 FERP16591 822 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 GAP43P17677 238 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 MAPK1P28482 360 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 TXKP42681 527 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 SLC1A4P43007 532 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 SMTNP53814 917 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 DRG2P55039 364 aaKnown RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 NAP1L1P55209 391 aaKnown RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 RASSF7Q02833 373 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 GUCY2DQ02846 1103 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 GRAPQ13588 217 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 TCEAL1Q15170 157 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 PTGISQ16647 500 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 KIAA0753Q2KHM9 967 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 SLC35G1Q2M3R5 365 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 NBPF9Q3BBW0 867 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 TTMPQ5BVD1 217 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 CC2D2BQ6DHV5 1058 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 FOXR1Q6PIV2 292 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 KRT26Q7Z3Y9 468 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 SLFN11Q7Z7L1 901 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 HOOK3Q86VS8 718 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 NBPF5PQ86XG9 351 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 GRAPLQ8TC17 118 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 MORC4Q8TE76 937 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 LRRC15Q8TF66 581 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 MTMR8Q96EF0 704 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 CCDC17Q96LX7 622 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 CCDC43Q96MW1 224 aaKnown RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 TRERF1Q96PN7 1200 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.05□□□□□ -1.281e-23■■■□□ 18.8
SNHG1-225ENST00000545920 MKNK1Q9BUB5 465 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms