RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 TGS1Q96RS0 853 aaKnown RBP13.22□□□□□ -0.29
LTBR-214ENST00000545445 GDPD2Q9HCC8 539 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 RGL1Q9NZL6 768 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 PPME1Q9Y570 386 aa13.22□□□□□ -0.29
LTBR-214ENST00000545445 GRXCR2A6NFK2 248 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 H3BQ06 376 aaPredicted RBP13.21□□□□□ -0.29
LTBR-214ENST00000545445 GJB5O95377 273 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 OATP04181 439 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 ZNF286BP0CG31 522 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 PSEN2P49810 448 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 PRKCEQ02156 737 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 CYP4A11Q02928 519 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 PTPN11Q06124 597 aaPredicted RBP13.21□□□□□ -0.29
LTBR-214ENST00000545445 MFSD10Q14728 455 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 RESP18Q5W5W9 173 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 TRIM50Q86XT4 487 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 BANK1Q8NDB2 785 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 RASSF8Q8NHQ8 419 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 EPSTI1Q96J88 318 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 MMTAG2Q9BU76 263 aaKnown RBP13.21□□□□□ -0.29
LTBR-214ENST00000545445 ANKEF1Q9NU02 776 aa13.21□□□□□ -0.29
LTBR-214ENST00000545445 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 RRN3P2A6NIE6 340 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 PP2D1A8MPX8 630 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 ZNF862O60290 1169 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 MED24O75448 989 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 GNAT1P11488 350 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 CDC25AP30304 524 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 CTTNQ14247 550 aaKnown RBP13.2□□□□□ -0.3
LTBR-214ENST00000545445 PLCB4Q15147 1175 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 PTGISQ16647 500 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 UGCGQ16739 394 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 ZNF484Q5JVG2 852 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 CNKSR3Q6P9H4 555 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 SHC4Q6S5L8 630 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 LRRC8DQ7L1W4 858 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 EXOC8Q8IYI6 725 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 CCDC155Q8N6L0 562 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
LTBR-214ENST00000545445 RAD9AQ99638 391 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 C17orf80Q9BSJ5 609 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 NIFKQ9BYG3 293 aaKnown RBP13.2□□□□□ -0.3
LTBR-214ENST00000545445 KIAA1024Q9UPX6 916 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 DNM3Q9UQ16 869 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 DOCK5Q9H7D0 1870 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 COL1A2P08123 1366 aa13.2□□□□□ -0.3
LTBR-214ENST00000545445 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 NRCAMQ92823 1304 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 NBNO60934 754 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 SELPP16109 830 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 ATP4AP20648 1035 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 MARK3P27448 753 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 YWHABP31946 246 aaKnown RBP13.19□□□□□ -0.3
LTBR-214ENST00000545445 UBE2HP62256 183 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 TMEM119Q4V9L6 283 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 RRAGBQ5VZM2 374 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 GDF6Q6KF10 455 aaPredicted RBP13.19□□□□□ -0.3
LTBR-214ENST00000545445 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 C7orf31Q8N865 590 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 IQUBQ8NA54 791 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 FBXO22Q8NEZ5 403 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
LTBR-214ENST00000545445 CCDC43Q96MW1 224 aaKnown RBP13.19□□□□□ -0.3
LTBR-214ENST00000545445 CUEDC2Q9H467 287 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 RNPEPQ9H4A4 650 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 DDX19AQ9NUU7 478 aaKnown RBP13.19□□□□□ -0.3
LTBR-214ENST00000545445 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 USP25Q9UHP3 1055 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 DBR1Q9UK59 544 aaKnown RBP13.19□□□□□ -0.3
LTBR-214ENST00000545445 TRPC6Q9Y210 931 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 TCHHQ07283 1943 aa13.19□□□□□ -0.3
LTBR-214ENST00000545445 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 STBD1O95210 358 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 EYA4O95677 639 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 ZP2Q05996 745 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 PPFIA1Q13136 1202 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
LTBR-214ENST00000545445 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
LTBR-214ENST00000545445 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 USP49Q70CQ1 688 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 ANO5Q75V66 913 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 PNMA5Q96PV4 448 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 JPH2Q9BR39 696 aaPredicted RBP13.18□□□□□ -0.3
LTBR-214ENST00000545445 KCNH6Q9H252 994 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 MAGEF1Q9HAY2 307 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 WRAP73Q9P2S5 460 aaPredicted RBP13.18□□□□□ -0.3
LTBR-214ENST00000545445 SEPT9Q9UHD8 586 aaPredicted RBP13.18□□□□□ -0.3
LTBR-214ENST00000545445 KCNH3Q9ULD8 1083 aa13.18□□□□□ -0.3
LTBR-214ENST00000545445 MAGEB2O15479 319 aa13.17□□□□□ -0.3
LTBR-214ENST00000545445 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms