RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 S100BP04271 92 aaPredicted RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 HOXA7P31268 230 aaPredicted RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 DRAP1Q14919 205 aaPredicted RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 TMED8Q6PL24 325 aaPredicted RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 NOP9Q86U38 636 aaKnown RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 KIF2CQ99661 725 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 ATP8B1O43520 1251 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 GYS2P54840 703 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 TMTC4Q5T4D3 741 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 SPOPLQ6IQ16 392 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 GSPT2Q8IYD1 628 aaKnown RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 PACSIN2Q9UNF0 486 aaPredicted RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 HEY1Q9Y5J3 304 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 USP27XA6NNY8 438 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 ZRANB2O95218 330 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHD4-211ENST00000544484 PHKA2P46019 1235 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 FAM133BQ5BKY9 247 aaKnown RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 PRR5LQ6MZQ0 368 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 PCSK1NQ9UHG2 260 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 CLGNO14967 610 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 CA4P22748 312 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 EPHB1P54762 984 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 GPC5P78333 572 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 DHX40Q8IX18 779 aaKnown RBP13.73□□□□□ -0.21
CHD4-211ENST00000544484 POLIQ9UNA4 740 aa13.73□□□□□ -0.21
CHD4-211ENST00000544484 PLS3P13797 630 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 SCN4BQ8IWT1 228 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 WHAMMQ8TF30 809 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 ELF1P32519 619 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 LMBRD2Q68DH5 695 aaPredicted RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 PRKAG2Q9UGJ0 569 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 TTC7AQ9ULT0 858 aaPredicted RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 MED14O60244 1454 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 GOLGA8MH3BSY2 632 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 RAB44Q7Z6P3 723 aaPredicted RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 DEPDC1BQ8WUY9 529 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 FAF2Q96CS3 445 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 CHMP6Q96FZ7 201 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 ACAD9Q9H845 621 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 NR1D1P20393 614 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 PSMC5P62195 406 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 IQCB1Q15051 598 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 NFRKBQ6P4R8 1299 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 ZNF34Q8IZ26 560 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 PARD3BQ8TEW8 1205 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 SPATA33Q96N06 139 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 SAYSD1Q9NPB0 183 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 TOPORSQ9NS56 1045 aaPredicted RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 HDAC6Q9UBN7 1215 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 FLT1P17948 1338 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 F5H423 210 aaPredicted RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 GPC3P51654 580 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 MTMR2Q13614 643 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 ARL13BQ3SXY8 428 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 CENPUQ71F23 418 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 CEP120Q8N960 986 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 LINC00116Q8NCU8 138 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 GIMAP8Q8ND71 665 aaPredicted RBP13.72□□□□□ -0.21
CHD4-211ENST00000544484 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 ATP8B3O60423 1300 aa13.72□□□□□ -0.21
CHD4-211ENST00000544484 OPHN1O60890 802 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 SFNP31947 248 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
CHD4-211ENST00000544484 CCHCR1Q8TD31 782 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 PLA2G12BQ9BX93 195 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 INTS2Q9H0H0 1204 aaKnown RBP13.71□□□□□ -0.21
CHD4-211ENST00000544484 OSBPL5Q9H0X9 879 aaPredicted RBP13.71□□□□□ -0.21
CHD4-211ENST00000544484 TTLL4Q14679 1199 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 APOBEC3FQ8IUX4 373 aaKnown RBP13.71□□□□□ -0.21
CHD4-211ENST00000544484 SLITRK6Q9H5Y7 841 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 SENP2Q9HC62 589 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 KIAA1586Q9HCI6 787 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 FBXO2Q9UK22 296 aaPredicted RBP13.71□□□□□ -0.21
CHD4-211ENST00000544484 ABCA6Q8N139 1617 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 TJP3O95049 919 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 KRT3P12035 628 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 GUF1Q8N442 669 aaKnown RBP13.71□□□□□ -0.21
CHD4-211ENST00000544484 EPC1Q9H2F5 836 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 HERC5Q9UII4 1024 aaKnown RBP13.71□□□□□ -0.21
CHD4-211ENST00000544484 BAG5Q9UL15 447 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 TAF6LQ9Y6J9 622 aa13.71□□□□□ -0.21
CHD4-211ENST00000544484 ESYT3A0FGR9 886 aa13.71□□□□□ -0.22
CHD4-211ENST00000544484 ARHGEF37A1IGU5 675 aa13.71□□□□□ -0.22
CHD4-211ENST00000544484 IL1RL1Q01638 556 aa13.71□□□□□ -0.22
CHD4-211ENST00000544484 ANKRD40Q6AI12 368 aa13.71□□□□□ -0.22
CHD4-211ENST00000544484 NUDCD1Q96RS6 583 aa13.71□□□□□ -0.22
CHD4-211ENST00000544484 MMP19Q99542 508 aa13.71□□□□□ -0.22
CHD4-211ENST00000544484 PLAAQ9Y263 795 aa13.71□□□□□ -0.22
CHD4-211ENST00000544484 UBE4BO95155 1302 aa13.71□□□□□ -0.22
CHD4-211ENST00000544484 FTLP02792 175 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms