RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 RHPN2Q8IUC4 686 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 KSR1Q8IVT5 923 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 SPRYD3Q8NCJ5 442 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 GUCD1Q96NT3 240 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 NACC1Q96RE7 527 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 FTHL17Q9BXU8 183 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 PTPRSQ13332 1948 aa24.29■■□□□ 1.48
OTUB1-212ENST00000543988 MICAL3Q7RTP6 2002 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 LCHNA4D1U4 455 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 VWA3AA6NCI4 1184 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 GAS2O43903 313 aaKnown RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 BMP15O95972 392 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 XRCC6P12956 609 aaKnown RBP eCLIP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 CDC25AP30304 524 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 SF3A1Q15459 793 aaKnown RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 PPP2R2DQ66LE6 453 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 ARL6IP4Q66PJ3 421 aaKnown RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 RTN4RL1Q86UN2 441 aaPredicted RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 PRPF31Q8WWY3 499 aaKnown RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 PSPC1Q8WXF1 523 aaKnown RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 NLRP4Q96MN2 994 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 MTRQ99707 1265 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 MMTAG2Q9BU76 263 aaKnown RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 TSPYL2Q9H2G4 693 aaPredicted RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 SLC28A3Q9HAS3 691 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 ATP6V0A4Q9HBG4 840 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 DBR1Q9UK59 544 aaKnown RBP24.28■■□□□ 1.48
OTUB1-212ENST00000543988 COL4A3BPQ9Y5P4 624 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 EVPLQ92817 2033 aa24.28■■□□□ 1.48
OTUB1-212ENST00000543988 A0A087WZ62 844 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 GPR182O15218 404 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 MGEA5O60502 916 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 USO1O60763 962 aaKnown RBP24.27■■□□□ 1.48
OTUB1-212ENST00000543988 CSDE1O75534 798 aaKnown RBP24.27■■□□□ 1.48
OTUB1-212ENST00000543988 DGAT1O75907 488 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 UPP2O95045 317 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 MUTP22033 750 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 KRT79Q5XKE5 535 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 ZNF410Q86VK4 478 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 TCP11Q8WWU5 503 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 TOP1MTQ969P6 601 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 RAD9AQ99638 391 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 FDXACB1Q9BRP7 624 aaPredicted RBP24.27■■□□□ 1.48
OTUB1-212ENST00000543988 CLIC4Q9Y696 253 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 STK24Q9Y6E0 443 aa24.27■■□□□ 1.48
OTUB1-212ENST00000543988 FGFR4P22455 802 aa24.26■■□□□ 1.47
OTUB1-212ENST00000543988 CDC42EP1Q00587 391 aa24.26■■□□□ 1.47
OTUB1-212ENST00000543988 LAMTOR4Q0VGL1 99 aa24.26■■□□□ 1.47
OTUB1-212ENST00000543988 GRIN2CQ14957 1233 aa24.26■■□□□ 1.47
OTUB1-212ENST00000543988 ODR4Q5SWX8 454 aa24.26■■□□□ 1.47
OTUB1-212ENST00000543988 GCOM2Q9BZD3 368 aaPredicted RBP24.26■■□□□ 1.47
OTUB1-212ENST00000543988 DDX19AQ9NUU7 478 aaKnown RBP24.26■■□□□ 1.47
OTUB1-212ENST00000543988 KIAA1024Q9UPX6 916 aa24.26■■□□□ 1.47
OTUB1-212ENST00000543988 ARID2Q68CP9 1835 aa24.26■■□□□ 1.47
OTUB1-212ENST00000543988 ARHGEF35A5YM69 484 aa24.25■■□□□ 1.47
OTUB1-212ENST00000543988 HTRA4P83105 476 aaPredicted RBP24.25■■□□□ 1.47
OTUB1-212ENST00000543988 TAP1Q03518 808 aa24.25■■□□□ 1.47
OTUB1-212ENST00000543988 ADAM2Q99965 735 aa24.25■■□□□ 1.47
OTUB1-212ENST00000543988 ZSCAN16Q9H4T2 348 aaPredicted RBP24.25■■□□□ 1.47
OTUB1-212ENST00000543988 GBF1Q92538 1859 aa24.24■■□□□ 1.47
OTUB1-212ENST00000543988 DSC3Q14574 896 aa24.24■■□□□ 1.47
OTUB1-212ENST00000543988 PTPAQ15257 358 aa24.24■■□□□ 1.47
OTUB1-212ENST00000543988 FOXD4L5Q5VV16 416 aaPredicted RBP24.24■■□□□ 1.47
OTUB1-212ENST00000543988 SPRED2Q7Z698 418 aa24.24■■□□□ 1.47
OTUB1-212ENST00000543988 ASAP3Q8TDY4 903 aa24.24■■□□□ 1.47
OTUB1-212ENST00000543988 FOXD4L4Q8WXT5 416 aaPredicted RBP24.24■■□□□ 1.47
OTUB1-212ENST00000543988 CDX2Q99626 313 aaPredicted RBP24.24■■□□□ 1.47
OTUB1-212ENST00000543988 IFT122Q9HBG6 1241 aa24.24■■□□□ 1.47
OTUB1-212ENST00000543988 DENND3A2RUS2 1198 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 SRGAP2CP0DJJ0 459 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 ARL2P36404 184 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 GRIN1Q05586 938 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 PADI6Q6TGC4 694 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 YME1L1Q96TA2 773 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 POLR3FQ9H1D9 316 aaPredicted RBP24.23■■□□□ 1.47
OTUB1-212ENST00000543988 BHMT2Q9H2M3 363 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 GPRC5CQ9NQ84 441 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 INSL6Q9Y581 213 aa24.23■■□□□ 1.47
OTUB1-212ENST00000543988 CHD7Q9P2D1 2997 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 IBSPP21815 317 aaPredicted RBP24.22■■□□□ 1.47
OTUB1-212ENST00000543988 CEBPZQ03701 1054 aaKnown RBP24.22■■□□□ 1.47
OTUB1-212ENST00000543988 PKP1Q13835 747 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 ZRSR1Q15695 479 aaKnown RBP24.22■■□□□ 1.47
OTUB1-212ENST00000543988 FAM43BQ6ZT52 329 aaPredicted RBP24.22■■□□□ 1.47
OTUB1-212ENST00000543988 MAEAQ7L5Y9 396 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 KCNK18Q7Z418 384 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 NPAS4Q8IUM7 802 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 CRIPAKQ8N1N5 446 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 RNF149Q8NC42 400 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 SP7Q8TDD2 431 aaPredicted RBP24.22■■□□□ 1.47
OTUB1-212ENST00000543988 USP28Q96RU2 1077 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 RGS18Q9NS28 235 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 CDH23Q9H251 3354 aa24.22■■□□□ 1.47
OTUB1-212ENST00000543988 LINC01553A4QN01 128 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 E9PMD0 336 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 ZSCAN22P10073 491 aaPredicted RBP24.21■■□□□ 1.47
OTUB1-212ENST00000543988 SFPQP23246 707 aaKnown RBP eCLIP24.21■■□□□ 1.47
OTUB1-212ENST00000543988 SARSP49591 514 aaKnown RBP24.21■■□□□ 1.47
OTUB1-212ENST00000543988 CAPSQ13938 189 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 MXD4Q14582 209 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms