RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 PLAGL2Q9UPG8 496 aa8.03□□□□□ -1.12
NUP43-206ENST00000543637 PPME1Q9Y570 386 aa8.03□□□□□ -1.12
NUP43-206ENST00000543637 MRPL42Q9Y6G3 142 aaKnown RBP8.03□□□□□ -1.12
NUP43-206ENST00000543637 PRRC2BQ5JSZ5 2229 aaKnown RBP8.03□□□□□ -1.12
NUP43-206ENST00000543637 FSD2A1L4K1 749 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 CARNS1A5YM72 827 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 EDIL3O43854 480 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 MGEA5O60502 916 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 MMP1P03956 469 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 LAG3P18627 525 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 SFPQP23246 707 aaKnown RBP eCLIP8.02□□□□□ -1.13
NUP43-206ENST00000543637 GPC3P51654 580 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 POLGP54098 1239 aaPredicted RBP8.02□□□□□ -1.13
NUP43-206ENST00000543637 UBE3AQ05086 875 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 PPP2R5CQ13362 524 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 UGCGQ16739 394 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 ME3Q16798 604 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 FAM102BQ5T8I3 360 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 NCAPH2Q6IBW4 605 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 ZNF410Q86VK4 478 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 RHPN2Q8IUC4 686 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 TPH2Q8IWU9 490 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 CRIPAKQ8N1N5 446 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 RNF169Q8NCN4 708 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.02□□□□□ -1.13
NUP43-206ENST00000543637 ETNPPLQ8TBG4 499 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 SPPL3Q8TCT6 385 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 POF1BQ8WVV4 589 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 TMEM40Q8WWA1 233 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 LINC01599Q8WXQ3 324 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 ZNF668Q96K58 619 aaPredicted RBP8.02□□□□□ -1.13
NUP43-206ENST00000543637 CEP170P1Q96L14 293 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 ZSCAN31Q96LW9 406 aaPredicted RBP8.02□□□□□ -1.13
NUP43-206ENST00000543637 CCDC43Q96MW1 224 aaKnown RBP8.02□□□□□ -1.13
NUP43-206ENST00000543637 TMEM117Q9H0C3 514 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 ADAMTS10Q9H324 1103 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 RC3H2Q9HBD1 1191 aaKnown RBP8.02□□□□□ -1.13
NUP43-206ENST00000543637 CYP26B1Q9NR63 512 aa8.02□□□□□ -1.13
NUP43-206ENST00000543637 TYW1Q9NV66 732 aaKnown RBP8.02□□□□□ -1.13
NUP43-206ENST00000543637 SUCLA2Q9P2R7 463 aaPredicted RBP8.02□□□□□ -1.13
NUP43-206ENST00000543637 ATG2AQ2TAZ0 1938 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 A0A087WZ62 844 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 GRXCR2A6NFK2 248 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 H3BQ06 376 aaPredicted RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 RBAK-RBAKDNI3L0D1 243 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 GAS2O43903 313 aaKnown RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 FGF18O76093 207 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 CSPG5O95196 566 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 ITGB1P05556 798 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 SRGAP2BP0DMP2 458 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 DARSP14868 501 aaKnown RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 RFC5P40937 340 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 TXKP42681 527 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 ALDH7A1P49419 539 aaKnown RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 NDUFV1P49821 464 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 GATMP50440 423 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 ADAM15Q13444 863 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 TARBP2Q15633 366 aaKnown RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 CALCRLQ16602 461 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 XKR9Q5GH70 373 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 TWF2Q6IBS0 349 aaKnown RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 CATSPER4Q7RTX7 472 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 ECHDC2Q86YB7 292 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 C4orf19Q8IY42 314 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 FAM184AQ8NB25 1140 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 TMEM87AQ8NBN3 555 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 NEK9Q8TD19 979 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 OXER1Q8TDS5 423 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 RSPH1Q8WYR4 309 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 GTF3C6Q969F1 213 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 PGBD4Q96DM1 585 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 ZNF558Q96NG5 402 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 NECAB3Q96P71 396 aaPredicted RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 SH2D3AQ9BRG2 576 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 FDXACB1Q9BRP7 624 aaPredicted RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 MRPL9Q9BYD2 267 aaKnown RBP8.01□□□□□ -1.13
NUP43-206ENST00000543637 ZSWIM4Q9H7M6 989 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 TLE6Q9H808 572 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 KCNMB3Q9NPA1 279 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 LIMCH1Q9UPQ0 1083 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 ARID2Q68CP9 1835 aa8.01□□□□□ -1.13
NUP43-206ENST00000543637 IGKV6-21A0A0C4DH24 114 aa8□□□□□ -1.13
NUP43-206ENST00000543637 A0A0U1RQF3 1178 aa8□□□□□ -1.13
NUP43-206ENST00000543637 BTBD18B2RXH4 712 aa8□□□□□ -1.13
NUP43-206ENST00000543637 EML1O00423 815 aa8□□□□□ -1.13
NUP43-206ENST00000543637 SLC37A4O43826 429 aa8□□□□□ -1.13
NUP43-206ENST00000543637 CSDE1O75534 798 aaKnown RBP8□□□□□ -1.13
NUP43-206ENST00000543637 CTDNEP1O95476 244 aa8□□□□□ -1.13
NUP43-206ENST00000543637 SRGAP2CP0DJJ0 459 aa8□□□□□ -1.13
NUP43-206ENST00000543637 FGFR1P11362 822 aa8□□□□□ -1.13
NUP43-206ENST00000543637 ALADP13716 330 aa8□□□□□ -1.13
NUP43-206ENST00000543637 FDPSP14324 419 aaKnown RBP8□□□□□ -1.13
NUP43-206ENST00000543637 ATP2B1P20020 1258 aa8□□□□□ -1.13
NUP43-206ENST00000543637 FGFR4P22455 802 aa8□□□□□ -1.13
NUP43-206ENST00000543637 YWHABP31946 246 aaKnown RBP8□□□□□ -1.13
NUP43-206ENST00000543637 CA8P35219 290 aa8□□□□□ -1.13
NUP43-206ENST00000543637 PPM1AP35813 382 aa8□□□□□ -1.13
NUP43-206ENST00000543637 RAB27AP51159 221 aa8□□□□□ -1.13
NUP43-206ENST00000543637 FOSBP53539 338 aa8□□□□□ -1.13
NUP43-206ENST00000543637 HYAL1Q12794 435 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms