RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 EIF4BP23588 611 aaKnown RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 RFC5P40937 340 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 EMC2Q15006 297 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 PAN2Q504Q3 1202 aaKnown RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 HAUS3Q68CZ6 603 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 FAM173BQ6P4H8 233 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 RTN4RL1Q86UN2 441 aaPredicted RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 FAM228AQ86W67 206 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 EXOC8Q8IYI6 725 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 RNF169Q8NCN4 708 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 PRPF31Q8WWY3 499 aaKnown RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 TOP1MTQ969P6 601 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 SNX21Q969T3 373 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 NACC1Q96RE7 527 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 GAS2L1Q99501 681 aaPredicted RBP12.32□□□□□ -0.44
DDB1-222ENST00000543627 FTHL17Q9BXU8 183 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 ADAMTS10Q9H324 1103 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 POLD4Q9HCU8 107 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 ERVK-5Q9HDB9 667 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 TUFT1Q9NNX1 390 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 KIAA1024Q9UPX6 916 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 INSL6Q9Y581 213 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 KDM3AQ9Y4C1 1321 aa12.32□□□□□ -0.44
DDB1-222ENST00000543627 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 ARHGEF15O94989 841 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 SPATA31C1P0DKV0 1188 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.442e-8■■■□□ 18.3
DDB1-222ENST00000543627 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
DDB1-222ENST00000543627 IL17AQ16552 155 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 FAM102BQ5T8I3 360 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 BRAPQ7Z569 592 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 SPRED2Q7Z698 418 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 LINC01465Q8N7H1 131 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
DDB1-222ENST00000543627 CEP89Q96ST8 783 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 ATP6V0A4Q9HBG4 840 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 ANKEF1Q9NU02 776 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 DDX19AQ9NUU7 478 aaKnown RBP12.31□□□□□ -0.44
DDB1-222ENST00000543627 PCDHB7Q9Y5E2 793 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 COL4A3BPQ9Y5P4 624 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 SQORQ9Y6N5 450 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 GBF1Q92538 1859 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 LOXHD1Q8IVV2 1947 aa12.31□□□□□ -0.44
DDB1-222ENST00000543627 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 IGKV6-21A0A0C4DH24 114 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 LAD1O00515 517 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 STX6O43752 255 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 MGEA5O60502 916 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 CSPG5O95196 566 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 SSBP05455 408 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDB1-222ENST00000543627 STAG3L1P0CL83 205 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 DARSP14868 501 aaKnown RBP12.3□□□□□ -0.44
DDB1-222ENST00000543627 LIG1P18858 919 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 RPA1P27694 616 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 RARRES1P49788 294 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 CDC42EP1Q00587 391 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 TAP1Q03518 808 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 LAMTOR4Q0VGL1 99 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 PDIA5Q14554 519 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
DDB1-222ENST00000543627 ECM1Q16610 540 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 LONRF3Q496Y0 759 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 SPOUT1Q5T280 376 aaKnown RBP12.3□□□□□ -0.44
DDB1-222ENST00000543627 CATSPER4Q7RTX7 472 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 RNF149Q8NC42 400 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 LINC01599Q8WXQ3 324 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 CDK5RAP3Q96JB5 506 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 POLR3CQ9BUI4 534 aaPredicted RBP12.3□□□□□ -0.44
DDB1-222ENST00000543627 DHX33Q9H6R0 707 aaKnown RBP12.3□□□□□ -0.44
DDB1-222ENST00000543627 CLIC4Q9Y696 253 aa12.3□□□□□ -0.44
DDB1-222ENST00000543627 DGAT1O75907 488 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 MARCKSP29966 332 aaPredicted RBP12.29□□□□□ -0.44
DDB1-222ENST00000543627 GATMP50440 423 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 ATP2C1P98194 919 aaPredicted RBP12.29□□□□□ -0.44
DDB1-222ENST00000543627 BTG3Q14201 252 aaPredicted RBP12.29□□□□□ -0.44
DDB1-222ENST00000543627 PADI6Q6TGC4 694 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 FIBCD1Q8N539 461 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 C17orf80Q9BSJ5 609 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 INO80BQ9C086 356 aaPredicted RBP12.29□□□□□ -0.44
DDB1-222ENST00000543627 POLR3FQ9H1D9 316 aaPredicted RBP12.29□□□□□ -0.44
DDB1-222ENST00000543627 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 GPRC5CQ9NQ84 441 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
DDB1-222ENST00000543627 DNM3Q9UQ16 869 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 MTMR6Q9Y217 621 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
DDB1-222ENST00000543627 STXBP5LQ9Y2K9 1186 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 PPME1Q9Y570 386 aa12.29□□□□□ -0.44
DDB1-222ENST00000543627 MICAL3Q7RTP6 2002 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 SIP14410 1827 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 LINC01553A4QN01 128 aa12.28□□□□□ -0.44
DDB1-222ENST00000543627 LRRIQ4A6NIV6 560 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms